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Automating Drug Design David Leahy
Competitive Workflow QSAR Example
Calculate Descriptors Filter feature request ... Model build request ... Calculate descriptors request ... responses responses responses QSAR Agent Model Build Filter Features
Calculate Descriptors Filter feature request ... Model build request ... Calculate descriptors request ... responses responses responses responses responses responses QSAR Agent Model Build Filter Features Calculate Descriptors
 
Open QSAR ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Data repository Model repository Service Repository QSAR Agent Bus Controller User Info Agent Info Agent Compute Agent Compute Agent Meta QSAR  Agent
Open QSAR ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],http://www.openqsar.com/
Open QSAR. Work in Progress ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Amazon Bus Server Amazon Worker Servers MS Azure Worker Servers Security Virtual Teams Inkspot Science Sci Software Services Workflow Cloud
Inkspot Science Agents
Inkspot Install to Azure
Data repository Inkspot Service Repository EC2 Azure QSAR Agent Bus Controller Compute Agent Compute Agent Info Agent Info Agent Meta QSAR  Agent Multi-Objective Optimisation Agent
Objective Space Feature Space Structure Space QSAR Model
Forager Particle Swarm Optimiser Project RTP Scale new leads Optimise Search Get Model
Colonist  Reduced Graph Genetic Algorithm Project RTP Scale Feature Space Solutions Founder  population Optimised Leads Optimise Structure Search Get Model Colonist  Build  QSAR Structure Property Database
Data repository Inkspot Service Repository EC2 Azure QSAR Agent Bus Controller Info Agent Info Agent Compute Agent Compute Agent Meta QSAR  Agent Meta QSAR Agent MOO Agent Docking Agent HTS Analysis Agent Virtual  Screening Agent Compute Agent Compute Agent
“ The Discovery Bus is not a tool for users. It is a system for doing drug design independent of any user” The ambition is a step-change in productivity arising from breaking the link between human effort and drug discovery output.

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Automating Drug Design Nov 13th 2009 97

  • 3. Calculate Descriptors Filter feature request ... Model build request ... Calculate descriptors request ... responses responses responses QSAR Agent Model Build Filter Features
  • 4. Calculate Descriptors Filter feature request ... Model build request ... Calculate descriptors request ... responses responses responses responses responses responses QSAR Agent Model Build Filter Features Calculate Descriptors
  • 5.  
  • 6.
  • 7. Data repository Model repository Service Repository QSAR Agent Bus Controller User Info Agent Info Agent Compute Agent Compute Agent Meta QSAR Agent
  • 8.
  • 9.
  • 10. Amazon Bus Server Amazon Worker Servers MS Azure Worker Servers Security Virtual Teams Inkspot Science Sci Software Services Workflow Cloud
  • 13. Data repository Inkspot Service Repository EC2 Azure QSAR Agent Bus Controller Compute Agent Compute Agent Info Agent Info Agent Meta QSAR Agent Multi-Objective Optimisation Agent
  • 14. Objective Space Feature Space Structure Space QSAR Model
  • 15. Forager Particle Swarm Optimiser Project RTP Scale new leads Optimise Search Get Model
  • 16. Colonist Reduced Graph Genetic Algorithm Project RTP Scale Feature Space Solutions Founder population Optimised Leads Optimise Structure Search Get Model Colonist Build QSAR Structure Property Database
  • 17. Data repository Inkspot Service Repository EC2 Azure QSAR Agent Bus Controller Info Agent Info Agent Compute Agent Compute Agent Meta QSAR Agent Meta QSAR Agent MOO Agent Docking Agent HTS Analysis Agent Virtual Screening Agent Compute Agent Compute Agent
  • 18. “ The Discovery Bus is not a tool for users. It is a system for doing drug design independent of any user” The ambition is a step-change in productivity arising from breaking the link between human effort and drug discovery output.