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Virtual Research Environment for Cancer Imaging

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Jisc
Jisc

Presented by Maria Susanna Avila Garcia at the JISC Future of Research Conference, 19th October 2010

Education
1 of 25
RIC Workshop 26 July 2010 A Virtual Research Environment for Cancer Imaging (VRE-CI)
Outline ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Background ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],They work at different locations Computing Lab Hospital Sharing image datasets.
Virtual Research Environment Research Context Web Services Code Scientific Workflows/ Activities End users ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
VRE-CI project is funded by the Joint Information Systems Committee (JISC) to provide a framework to allow researchers and clinicians involved in Cancer Imaging to share information, images and algorithms. A Virtual Research Environment for Cancer Imaging (VRE-CI) ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
VRE-CI
Use cases ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Project Outputs ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Loading images into the system ,[object Object],[object Object],[object Object],[object Object]
Subjects Confidential information Anonymised data sets No confidential information No need to remove any metadata Define personalised filters to fit needs from each user/research scenario
Configuration Files Use of configuration files to personalise metadata filters according to each user preferences.
Loading images
Image Metadata
Dicom Image Properties / Zoom in
Image Viewer ,[object Object],[object Object],[object Object]
What is Silverlight DeepZoom? ,[object Object],[object Object],[object Object]
Image Viewer / Deep zoom functionality
 
Image analysis
Scientific Workflows/ Trident ,[object Object],[object Object],[object Object],[object Object],[object Object]
Oxford University Groupware ,[object Object],[object Object]
SharePoint 2010 Pros & Cons ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Acknowledgements ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],British Library – Stephen Andrews
Thanks!
Questions? ,[object Object]

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