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Xenobiotic Metabolism
A xenobiotic (Gk xenos “stranger”) is a
compound that is foreign to the body.
BIOMEDICAL IMPORTANCE


Increasingly, humans are subjected to exposure to various
foreign chemicals (xenobiotics)—drugs, food additives,
pollutants, etc.
Knowledge of the metabolism of xenobiotics is basic to
a rational understanding of pharmacology and
therapeutics, pharmacy, toxicology, management of
cancer, and drug addiction. All these areas involve
administration of, or exposure to, xenobiotics.
xenobiotics
• drugs
• chemical carcinogens
• insecticides
• various compounds that have found their way
   into our environment by one route or another
• polychlorinated biphenyls (PCBs)
• More than 200,000 manufactured environmental
   chemicals
• Most of these compounds are subject to
  metabolism (chemical alteration) in the
  human body
• with the liver being the main organ involved;
• occasionally a xenobiotic may be excreted
  unchanged.
• 30 different enzymes catalyze reactions
  involved in xenobiotic metabolism
It is convenient to consider the metabolism of
 xenobiotics in two phases
phase 1
 1. Hydroxylation
     Monooxygenases or cytochrome P450s.
    Hydroxylation may terminate the action of a
     drug
  2. deamination, dehalogenation, desulfuration,

    epoxidation, peroxygenation, and reduction,
    hydrolysis.
Phase 2
  conjugation with glucuronic acid, sulfate,
  acetate, glutathione, or certain amino acids,
  or by methylation.
The overall purpose of the two phases of
metabolism of xenobiotics is to increase their
water solubility (polarity) and thus excretion
from the body
Very hydrophobic xenobiotics would persist
in adipose tissue almost indefinitely if they
were not converted to more polar forms.
In certain cases, phase 1 metabolic reactions
 convert xenobiotics from inactive to biologically
active compounds. In these instances, the original
    xenobiotics are referred to as “prodrugs” or
                 “procarcinogens.”
The term “detoxification” is sometimes used for
many of the reactions involved in the metabolism
                 of xenobiotics.
ISOFORMS OF CYTOCHROME P450
    HYDROXYLATE A MYRIAD
   OF XENOBIOTICS IN PHASE 1
     OF THEIR METABOLISM
• Hydroxylation is the chief reaction involved
• The responsible enzymes are called
  monooxygenases or cytochrome P450s;
• The human genome encodes at least 14
  families of these enzymes.
• The reaction catalyzed by a monooxygenase
  (cytochrome P450) is as follows:
It has been shown by the use of O2 that one atom of
oxygen enters ROH and one atom enters water. This
dual fate of the oxygen accounts for the former
naming of monooxygenases as “mixed function
oxidases.”
approximately 50% of the drugs humans
ingest are metabolized by isoforms of
cytochrome P450; these enzymes also act on
various carcinogens and pollutants.
Cytochrome P450
• large number of isoforms (about 150) that
  have been discovered, it became important to
  have a systematic nomenclature for isoforms
  of P450 and for their genes.
• Example : CYP1A1 denotes a cytochrome P450
  that is a member of family 1 and subfamily A
  and is the first individual member of that
  subfamily
• The nomenclature for the genes encoding
  cytochrome P450s is identical to that
  described except that italics are used; thus,
  the gene encoding CYP1A1 is CYP1A1.
• They are hemoproteins
• They are widely distributed across species.
  Bacteria possess cytochrome P450s, and
  P450cam
• They are present in highest amount in liver
  and small intestine but are probably present
  in all tissues.
• In liver and most other tissues, they are
  present mainly in the membranes of the
  smooth endoplasmic reticulum
• In the adrenal, they are found in mitochondria
  as well as in the endoplasmic reticulum;
• The various hydroxylases present in that organ
  play an important role in cholesterol and steroid
  biosynthesis
• At least six isoforms of cytochrome P450 are
  present in the endoplasmic reticulum of
  human liver,
• each with wide and somewhat overlapping
  substrate specificities and acting on both
  xenobiotics and endogenous compounds.
• NADPH, not NADH, is involved in the reaction
  mechanism of cytochrome P450.
• The enzyme that uses NADPH to yield the
  reduced cytochrome P450, called NADPH-
  cytochrome P450 reductase.
• Lipids are also components of the cytochrome
  P450 system.
• The preferred lipid is phosphatidylcholine,
  which is the major lipid found in membranes
  of the endoplasmic reticulum
• Most isoforms of cytochrome P450 are
  inducible.
• Induction of cytochrome P450 has important
  clinical implications, since it is a biochemical
  mechanism of drug interaction.
As an illustration:

Patient is taking the anticoagulant warfarin to prevent
blood clotting.
This drug is metabolized by CYP2C9.

Concomitantly, the patient is started on phenobarbital
(an inducer of this P450) to treat a certain type of
epilepsy, but thedose of warfarin is not changed.
After 5 days or so, the level of CYP2C9 in the
patient’s liver will be elevated three- to fourfold.

This in turn means that warfarin will be metabolized
much more quickly than before, and its dosage will
have become inadequate. Therefore, the
dose must be increased if warfarin is to be
therapeutically effective.
To pursue this example further, a problem could arise later
on if the phenobarbital is discontinued but the increased
dosage of warfarin stays the same.

The patient will be at risk of bleeding, since the high dose of
warfarin will be even more active than before, because the
level of CYP2C9 will decline once phenobarbital has been
stopped.
• P450 metabolizes certain widely used solvents
  and also components found in tobacco smoke,
  many of which are established carcinogens.
Certain isoforms of cytochrome P450 (eg, CYP1A1) are
particularly involved in the metabolism of polycyclic
aromatic hydrocarbons (PAHs) and related
molecules;

for this reason they were formerly called aromatic
hydrocarbon hydroxylases (AHHs). This enzyme is
important in the metabolism of PAHs and in
carcinogenesis produced by these agents.
Certain cytochrome P450s exist in polymorphic forms
(genetic isoforms), some of which exhibit low catalytic
activity.



One P450 exhibiting polymorphism is CYP2D6, which
is involved in the metabolism of debrisoquin (an anti
hypertensive drug) and sparteine (an anti arrhythmic
and oxytocic drug).
Another interesting polymorphism is that of CYP2A6, which is involved in the
metabolism of nicotine to conitine. Three CYP2A6 alleles have been identified: a
wild type and two null or inactive alleles.

It has been reported that individuals with the null alleles, who have impaired
metabolism of nicotine, are apparently protected against becoming tobacco-
dependent smokers

These individuals smoke less, presumably because their blood and brain
concentrations of nicotine remain elevated longer than those of individuals with
the wild-type allele. It has been speculated that inhibiting CYP2A6 may be a
novel way to help prevent and to treat smoking.
In phase 1 reactions, xenobiotics are generally converted to
more polar, hydroxylated derivatives. In phase 2
reactions, these derivatives are conjugated with molecules
such as glucuronic acid, sulfate, or glutathione.
This renders them even more water-soluble, and they are
eventually excreted in the urine or bile.
A. GLUCURONIDATION
UDP-glucuronic acid is the glucuronyl donor, and a variety
of glucuronosyltransferases, present in both the
endoplasmic reticulum and cytosol, are the catalysts.




Molecules such as 2-acetylaminofluorene (a
carcinogen), aniline, benzoic acid, meprobamate (a
tranquilizer), phenol, and many steroids are excreted as
glucuronides.
The glucuronide may be attached to oxygen,
nitrogen, or sulfur groups of the substrates.
Glucuronidation is probably the most frequent
conjugation reaction.
B. SULFATION



 Some alcohols, arylamines, and phenols are sulfated.


 The sulfate donor in these and other biologic sulfation reactions (eg,
 sulfation of steroids, glycosaminoglycans, glycolipids, and glycoproteins)
 is adenosine 3-phosphate-5-phosphosulfate (PAPS)
C. CONJUGATION WITH GLUTATHIONE
Glutathione (γ-glutamyl-cysteinylglycine) is a tripeptide consisting of
glutamic acid, cysteine, and glycine

Glutathione is commonly abbreviated GSH (because of the sulfhydryl group
of its cysteine, which is the business part of the molecule).
A number of potentially toxic electrophilic xenobiotics (such as
certain carcinogens) are conjugated to the nucleophilic GSH in
reactions that can be represented as follows:
The enzymes catalyzing these reactions are called
    glutathione S transferases and are present in high amounts
    in liver cytosol and in lower amounts in other tissues.



If the potentially toxic xenobiotics were not conjugated to GSH, they
would be free to combine covalently with DNA, RNA, or cell protein and
could thus lead to serious cell damage
The glutamyl and glycinyl groups belonging to glutathione are
removed by specific Enzymes

acetyl group (donated by acetyl- CoA) is added to the amino group
of the remaining cysteinyl moiety.

The resulting compound is a mercapturic acid, a conjugate of L
acetylcysteine, which is then excreted in the urine.
D. OTHER REACTIONS

       1. Acetylation




These reactions are catalyzed by acetyltransferases present in the cytosol of
various tissues, particularly liver.


The drug isoniazid, used in the treatment of tuberculosis, is subject to
acetylation.

Polymorphic types of acetyltransferases exist, resulting in individuals who are
classified as slow or fast acetylators,
2. Methylation

A few xenobiotics are subject to methylation by
methyltransferases, employing S-adenosylmethionine as
methyl donor
Toxic effects of xenobiotics

1. cell injury (cytotoxicity)

2. the reactive species of a xenobiotic may bind to a protein, altering its antigenicity.
   The xenobiotic is said to act as a hapten, ie, a small molecule that by itself does
   not stimulate antibody synthesis but will combine with antibody once formed

3. Third, reactions of activated species of chemical carcinogens with DNA are thought
   to be of great importance in chemical carcinogenesis
epoxide hydrolase




The enzyme epoxide hydrolase is of interest because it can exert a protective
effect against certain carcinogens.

The products of the action of certain monooxygenases on some procarcinogen
substrates are epoxides. Epoxides are highly reactive and mutagenic or
carcinogenic or both.

Epoxide acts on these compounds, converting them into much less reactive
dihydrodiols.
Thank you

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Xenobiotic metabolism

  • 2.
  • 3.
  • 4.
  • 5.
  • 6. A xenobiotic (Gk xenos “stranger”) is a compound that is foreign to the body.
  • 7. BIOMEDICAL IMPORTANCE Increasingly, humans are subjected to exposure to various foreign chemicals (xenobiotics)—drugs, food additives, pollutants, etc.
  • 8. Knowledge of the metabolism of xenobiotics is basic to a rational understanding of pharmacology and therapeutics, pharmacy, toxicology, management of cancer, and drug addiction. All these areas involve administration of, or exposure to, xenobiotics.
  • 9.
  • 10. xenobiotics • drugs • chemical carcinogens • insecticides • various compounds that have found their way into our environment by one route or another • polychlorinated biphenyls (PCBs) • More than 200,000 manufactured environmental chemicals
  • 11. • Most of these compounds are subject to metabolism (chemical alteration) in the human body • with the liver being the main organ involved; • occasionally a xenobiotic may be excreted unchanged. • 30 different enzymes catalyze reactions involved in xenobiotic metabolism
  • 12.
  • 13. It is convenient to consider the metabolism of xenobiotics in two phases
  • 14. phase 1 1. Hydroxylation Monooxygenases or cytochrome P450s. Hydroxylation may terminate the action of a drug 2. deamination, dehalogenation, desulfuration, epoxidation, peroxygenation, and reduction, hydrolysis.
  • 15. Phase 2 conjugation with glucuronic acid, sulfate, acetate, glutathione, or certain amino acids, or by methylation.
  • 16. The overall purpose of the two phases of metabolism of xenobiotics is to increase their water solubility (polarity) and thus excretion from the body
  • 17. Very hydrophobic xenobiotics would persist in adipose tissue almost indefinitely if they were not converted to more polar forms.
  • 18. In certain cases, phase 1 metabolic reactions convert xenobiotics from inactive to biologically active compounds. In these instances, the original xenobiotics are referred to as “prodrugs” or “procarcinogens.”
  • 19. The term “detoxification” is sometimes used for many of the reactions involved in the metabolism of xenobiotics.
  • 20. ISOFORMS OF CYTOCHROME P450 HYDROXYLATE A MYRIAD OF XENOBIOTICS IN PHASE 1 OF THEIR METABOLISM
  • 21.
  • 22. • Hydroxylation is the chief reaction involved • The responsible enzymes are called monooxygenases or cytochrome P450s; • The human genome encodes at least 14 families of these enzymes.
  • 23. • The reaction catalyzed by a monooxygenase (cytochrome P450) is as follows:
  • 24.
  • 25.
  • 26. It has been shown by the use of O2 that one atom of oxygen enters ROH and one atom enters water. This dual fate of the oxygen accounts for the former naming of monooxygenases as “mixed function oxidases.”
  • 27. approximately 50% of the drugs humans ingest are metabolized by isoforms of cytochrome P450; these enzymes also act on various carcinogens and pollutants.
  • 28. Cytochrome P450 • large number of isoforms (about 150) that have been discovered, it became important to have a systematic nomenclature for isoforms of P450 and for their genes. • Example : CYP1A1 denotes a cytochrome P450 that is a member of family 1 and subfamily A and is the first individual member of that subfamily
  • 29. • The nomenclature for the genes encoding cytochrome P450s is identical to that described except that italics are used; thus, the gene encoding CYP1A1 is CYP1A1. • They are hemoproteins • They are widely distributed across species. Bacteria possess cytochrome P450s, and P450cam
  • 30. • They are present in highest amount in liver and small intestine but are probably present in all tissues. • In liver and most other tissues, they are present mainly in the membranes of the smooth endoplasmic reticulum
  • 31.
  • 32. • In the adrenal, they are found in mitochondria as well as in the endoplasmic reticulum; • The various hydroxylases present in that organ play an important role in cholesterol and steroid biosynthesis
  • 33. • At least six isoforms of cytochrome P450 are present in the endoplasmic reticulum of human liver, • each with wide and somewhat overlapping substrate specificities and acting on both xenobiotics and endogenous compounds.
  • 34. • NADPH, not NADH, is involved in the reaction mechanism of cytochrome P450. • The enzyme that uses NADPH to yield the reduced cytochrome P450, called NADPH- cytochrome P450 reductase.
  • 35. • Lipids are also components of the cytochrome P450 system. • The preferred lipid is phosphatidylcholine, which is the major lipid found in membranes of the endoplasmic reticulum
  • 36. • Most isoforms of cytochrome P450 are inducible. • Induction of cytochrome P450 has important clinical implications, since it is a biochemical mechanism of drug interaction.
  • 37.
  • 38. As an illustration: Patient is taking the anticoagulant warfarin to prevent blood clotting. This drug is metabolized by CYP2C9. Concomitantly, the patient is started on phenobarbital (an inducer of this P450) to treat a certain type of epilepsy, but thedose of warfarin is not changed.
  • 39. After 5 days or so, the level of CYP2C9 in the patient’s liver will be elevated three- to fourfold. This in turn means that warfarin will be metabolized much more quickly than before, and its dosage will have become inadequate. Therefore, the dose must be increased if warfarin is to be therapeutically effective.
  • 40. To pursue this example further, a problem could arise later on if the phenobarbital is discontinued but the increased dosage of warfarin stays the same. The patient will be at risk of bleeding, since the high dose of warfarin will be even more active than before, because the level of CYP2C9 will decline once phenobarbital has been stopped.
  • 41. • P450 metabolizes certain widely used solvents and also components found in tobacco smoke, many of which are established carcinogens.
  • 42. Certain isoforms of cytochrome P450 (eg, CYP1A1) are particularly involved in the metabolism of polycyclic aromatic hydrocarbons (PAHs) and related molecules; for this reason they were formerly called aromatic hydrocarbon hydroxylases (AHHs). This enzyme is important in the metabolism of PAHs and in carcinogenesis produced by these agents.
  • 43. Certain cytochrome P450s exist in polymorphic forms (genetic isoforms), some of which exhibit low catalytic activity. One P450 exhibiting polymorphism is CYP2D6, which is involved in the metabolism of debrisoquin (an anti hypertensive drug) and sparteine (an anti arrhythmic and oxytocic drug).
  • 44.
  • 45. Another interesting polymorphism is that of CYP2A6, which is involved in the metabolism of nicotine to conitine. Three CYP2A6 alleles have been identified: a wild type and two null or inactive alleles. It has been reported that individuals with the null alleles, who have impaired metabolism of nicotine, are apparently protected against becoming tobacco- dependent smokers These individuals smoke less, presumably because their blood and brain concentrations of nicotine remain elevated longer than those of individuals with the wild-type allele. It has been speculated that inhibiting CYP2A6 may be a novel way to help prevent and to treat smoking.
  • 46.
  • 47. In phase 1 reactions, xenobiotics are generally converted to more polar, hydroxylated derivatives. In phase 2 reactions, these derivatives are conjugated with molecules such as glucuronic acid, sulfate, or glutathione. This renders them even more water-soluble, and they are eventually excreted in the urine or bile.
  • 49.
  • 50. UDP-glucuronic acid is the glucuronyl donor, and a variety of glucuronosyltransferases, present in both the endoplasmic reticulum and cytosol, are the catalysts. Molecules such as 2-acetylaminofluorene (a carcinogen), aniline, benzoic acid, meprobamate (a tranquilizer), phenol, and many steroids are excreted as glucuronides.
  • 51. The glucuronide may be attached to oxygen, nitrogen, or sulfur groups of the substrates. Glucuronidation is probably the most frequent conjugation reaction.
  • 52. B. SULFATION Some alcohols, arylamines, and phenols are sulfated. The sulfate donor in these and other biologic sulfation reactions (eg, sulfation of steroids, glycosaminoglycans, glycolipids, and glycoproteins) is adenosine 3-phosphate-5-phosphosulfate (PAPS)
  • 53. C. CONJUGATION WITH GLUTATHIONE Glutathione (γ-glutamyl-cysteinylglycine) is a tripeptide consisting of glutamic acid, cysteine, and glycine Glutathione is commonly abbreviated GSH (because of the sulfhydryl group of its cysteine, which is the business part of the molecule).
  • 54. A number of potentially toxic electrophilic xenobiotics (such as certain carcinogens) are conjugated to the nucleophilic GSH in reactions that can be represented as follows:
  • 55. The enzymes catalyzing these reactions are called glutathione S transferases and are present in high amounts in liver cytosol and in lower amounts in other tissues. If the potentially toxic xenobiotics were not conjugated to GSH, they would be free to combine covalently with DNA, RNA, or cell protein and could thus lead to serious cell damage
  • 56. The glutamyl and glycinyl groups belonging to glutathione are removed by specific Enzymes acetyl group (donated by acetyl- CoA) is added to the amino group of the remaining cysteinyl moiety. The resulting compound is a mercapturic acid, a conjugate of L acetylcysteine, which is then excreted in the urine.
  • 57. D. OTHER REACTIONS 1. Acetylation These reactions are catalyzed by acetyltransferases present in the cytosol of various tissues, particularly liver. The drug isoniazid, used in the treatment of tuberculosis, is subject to acetylation. Polymorphic types of acetyltransferases exist, resulting in individuals who are classified as slow or fast acetylators,
  • 58. 2. Methylation A few xenobiotics are subject to methylation by methyltransferases, employing S-adenosylmethionine as methyl donor
  • 59.
  • 60. Toxic effects of xenobiotics 1. cell injury (cytotoxicity) 2. the reactive species of a xenobiotic may bind to a protein, altering its antigenicity. The xenobiotic is said to act as a hapten, ie, a small molecule that by itself does not stimulate antibody synthesis but will combine with antibody once formed 3. Third, reactions of activated species of chemical carcinogens with DNA are thought to be of great importance in chemical carcinogenesis
  • 61.
  • 62. epoxide hydrolase The enzyme epoxide hydrolase is of interest because it can exert a protective effect against certain carcinogens. The products of the action of certain monooxygenases on some procarcinogen substrates are epoxides. Epoxides are highly reactive and mutagenic or carcinogenic or both. Epoxide acts on these compounds, converting them into much less reactive dihydrodiols.
  • 63.