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                                                                                                             VLDB
                                        Column-Oriented                                                      2009
                                                                                                            Tutorial
                                       Database Systems
             Part 1: Stavros Harizopoulos (HP Labs)
             Part 2: Daniel Abadi (Yale)
             Part 3: Peter Boncz (CWI)




                                                                  VLDB 2009 Tutorial                                   1
                                                           Column-Oriented Database Systems
Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009)




   What is a column-store?

                      row-store                                                                  column-store
                                                                        Date         Store         Product   Customer   Price
 Date       Store Product Customer Price




    + easy to add/modify a record                                          + only need to read in relevant data

    - might read in unnecessary data                                       - tuple writes require multiple accesses


                => suitable for read-mostly, read-intensive, large data repositories



            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                      2
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   Are these two fundamentally different?
   l     The only fundamental difference is the storage layout
   l     However: we need to look at the big picture

              different storage layouts proposed
       row-stores                        row-stores++                                row-stores++           converge?


    ‘70s                ‘80s                  ‘90s               ‘00s                 today
                                                                                  column-stores
                 new applications
             new bottleneck in hardware


  l     How did we get here, and where we are heading Part 1
  l     What are the column-specific optimizations?          Part 2
  l     How do we improve CPU efficiency when operating on Cs
                                                                                                               Part 3
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems            3
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   Outline
   l     Part 1: Basic concepts — Stavros
         l      Introduction to key features
         l      From DSM to column-stores and performance tradeoffs
         l      Column-store architecture overview
         l      Will rows and columns ever converge?

   l     Part 2: Column-oriented execution — Daniel

   l     Part 3: MonetDB/X100 and CPU efficiency — Peter



             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       4
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    Telco Data Warehousing example
l    Typical DW installation                                            dimension tables
                                                                           account                     fact table
                                                                                or RAM
l    Real-world example                                                                                     usage        source

“One Size Fits All? - Part 2: Benchmarking                                        toll
Results” Stonebraker et al. CIDR 2007                                                                                 star schema

                      QUERY 2
         SELECT account.account_number,
         sum (usage.toll_airtime),
         sum (usage.toll_price)                                                              Column-store           Row-store
         FROM usage, toll, source, account
         WHERE usage.toll_id = toll.toll_id
                                                                             Query 1         2.06                   300
         AND usage.source_id = source.source_id                              Query 2         2.20                   300
         AND usage.account_id = account.account_id
         AND toll.type_ind in (‘AE’. ‘AA’)
                                                                             Query 3         0.09                   300
         AND usage.toll_price > 0                                            Query 4         5.24                   300
         AND source.type != ‘CIBER’
         AND toll.rating_method = ‘IS’
                                                                             Query 5         2.88                   300
         AND usage.invoice_date = 20051013
         GROUP BY account.account_number
                                                                                   Why? Three main factors (next slides)
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                           5
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   Telco example explained (1/3):
   read efficiency
                       row store                                                                        column store




 read pages containing entire rows                                                    read only columns needed

 one row = 212 columns!                                                               in this example: 7 columns

 is this typical? (it depends)                                                        caveats:
                                                                                      • “select * ” not any faster
                                                                                      • clever disk prefetching
    What about vertical partitioning?
                                                                                      • clever tuple reconstruction
    (it does not work with ad-hoc
    queries)
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                  6
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   Telco example explained (2/3):
   compression efficiency
   l     Columns compress better than rows
         l      Typical row-store compression ratio 1 : 3
         l      Column-store 1 : 10

   l     Why?
         l     Rows contain values from different domains
               => more entropy, difficult to dense-pack
         l     Columns exhibit significantly less entropy
         l     Examples:                 Male, Female, Female, Female, Male
                                                                    1998, 1998, 1999, 1999, 1999, 2000

         l      Caveat: CPU cost (use lightweight compression)


             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       7
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   Telco example explained (3/3):
   sorting & indexing efficiency
   l     Compression and dense-packing free up space
         l      Use multiple overlapping column collections
         l      Sorted columns compress better
         l      Range queries are faster
         l      Use sparse clustered indexes


          What about heavily-indexed row-stores?
          (works well for single column access,
          cross-column joins become increasingly expensive)




             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       8
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   Additional opportunities for column-stores
   l     Block-tuple / vectorized processing
         l      Easier to build block-tuple operators
                l   Amortizes function-call cost, improves CPU cache performance
         l      Easier to apply vectorized primitives
                l   Software-based: bitwise operations
                l   Hardware-based: SIMD              Part 3

   l     Opportunities with compressed columns
         l      Avoid decompression: operate directly on compressed
         l      Delay decompression (and tuple reconstruction)
                                                                                                                      more
                l   Also known as: late materialization                                                             in Part 2

   l     Exploit columnar storage in other DBMS components
         l      Physical design (both static and dynamic)                                                   See: Database
                                                                                                            Cracking, from CWI
             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                     9
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                                                                                                        “Column-Stores vs Row-Stores:
                                                                                                        How Different are They
 Effect on C-Store performance                                                                          Really?” Abadi, Hachem, and
                                                                                                        Madden. SIGMOD 2008.

                                              Average for SSBM queries on C-store


                                                                                                                   original
                    Time (sec)




                                                                                                                   C-store




                                                                                                                     enable
                                                                                                                       late
                                 column-oriented                                  enable                          materialization
                                  join algorithm                              compression &
                                                                          operate on compressed


            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                          10
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   Summary of column-store key features
                                                                                 columnar storage
                                                                                                                   Part 1
                                                                                    header/ID elimination
   l     Storage layout
                                                                                        compression         Part 2      Part 3

                                                                                            multiple sort orders



                                                                               column operators               Part 1        Part 2

                                                                                  avoid decompression
   l     Execution engine                                                                                          Part 2
                                                                                       late materialization

                                                                                          vectorized operations         Part 3

   l     Design tools, optimizer
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                        11
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   Outline
   l     Part 1: Basic concepts — Stavros
         l      Introduction to key features
         l      From DSM to column-stores and performance tradeoffs
         l      Column-store architecture overview
         l      Will rows and columns ever converge?

   l     Part 2: Column-oriented execution — Daniel

   l     Part 3: MonetDB/X100 and CPU efficiency — Peter



             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       12
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   From DSM to Column-stores
                                       TOD: Time Oriented Database – Wiederhold et al.
   70s -1985:                          "A Modular, Self-Describing Clinical Databank
                                       System," Computers and Biomedical Research, 1975
                                       More 1970s: Transposed files, Lorie, Batory,
                                       Svensson.
                                       “An overview of cantor: a new system for data analysis”
                                        Karasalo, Svensson, SSDBM 1983

   1985: DSM paper                                  “A decomposition storage model”
                                                    Copeland and Khoshafian. SIGMOD 1985.

   1990s: Commercialization through SybaseIQ
   Late 90s – 2000s: Focus on main-memory performance
         l      DSM “on steroids” [1997 – now]                                              CWI: MonetDB

         l      Hybrid DSM/NSM [2001 – 2004]                                               Wisconsin: PAX, Fractured Mirrors

                                                                              Michigan: Data Morphing                  CMU: Clotho
   2005 – : Re-birth of read-optimized DSM as “column-store”
                            MIT: C-Store                    CWI: MonetDB/X100                               10+ startups
             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                         13
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                                                                               “A decomposition storage
The original DSM paper                                                         model” Copeland and
                                                                               Khoshafian. SIGMOD 1985.
         l      Proposed as an alternative to NSM
         l      2 indexes: clustered on ID, non-clustered on value
         l      Speeds up queries projecting few columns
         l      Requires more storage                              value
                                                                                          ID                0100 0962 1000 ..
                                                                             1 2 3 4 ..




             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                   14
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   Memory wall and PAX
  l     90s: Cache-conscious research
         “Cache Conscious Algorithms for
   from: Relational Query Processing.”
         Shatdal, Kant, Naughton. VLDB 1994.
                                                                                         “DBMSs on a modern processor:
    “Database Architecture Optimized for                                            and: Where does time go?” Ailamaki,
to: the New Bottleneck: Memory Access.”                                                  DeWitt, Hill, Wood. VLDB 1999.
    Boncz, Manegold, Kersten. VLDB 1999.


  l     PAX: Partition Attributes Across
        l     Retains NSM I/O pattern
        l     Optimizes cache-to-RAM communication
          “Weaving Relations for Cache Performance.”
          Ailamaki, DeWitt, Hill, Skounakis, VLDB 2001.


            VLDB 2009 Tutorial                                       Column-Oriented Database Systems             15
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   More hybrid NSM/DSM schemes
   l     Dynamic PAX: Data Morphing
                                                               “Data morphing: an adaptive, cache-conscious
                                                               storage technique.” Hankins, Patel, VLDB 2003.

   l     Clotho: custom layout using scatter-gather I/O
                            “Clotho: Decoupling Memory Page Layout from Storage Organization.”
                            Shao, Schindler, Schlosser, Ailamaki, and Ganger. VLDB 2004.

   l     Fractured mirrors
         l      Smart mirroring with both NSM/DSM copies
                                                                                                            “A Case For Fractured
                                                                                                            Mirrors.” Ramamurthy,
                                                                                                            DeWitt, Su, VLDB 2002.




             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                        16
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   MonetDB (more in Part 3)
   l     Late 1990s, CWI: Boncz, Manegold, and Kersten
   l     Motivation:
         l      Main-memory
         l      Improve computational efficiency by avoiding expression
                interpreter
         l      DSM with virtual IDs natural choice
         l      Developed new query execution algebra
   l     Initial contributions:
         l      Pointed out memory-wall in DBMSs
         l      Cache-conscious projections and joins
         l      …

             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       17
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   2005: the (re)birth of column-stores
   l     New hardware and application realities
         l      Faster CPUs, larger memories, disk bandwidth limit
         l      Multi-terabyte Data Warehouses
   l     New approach: combine several techniques
         l     Read-optimized, fast multi-column access,
               disk/CPU efficiency, light-weight compression

   l     C-store paper:
         l      First comprehensive design description of a column-store
   l     MonetDB/X100
         l      “proper” disk-based column store
   l     Explosion of new products
             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       18
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   Performance tradeoffs: columns vs. rows
    DSM traditionally was not favored by technology trends
    How has this changed?

    l     Optimized DSM in “Fractured Mirrors,” 2002
    l     “Apples-to-apples” comparison “Performance Tradeoffs in Read-
                                                                                        Optimized Databases”
                                                                                        Harizopoulos, Liang, Abadi,
                                                                                        Madden, VLDB’06
    l     Follow-up study                           “Read-Optimized Databases, In-
                                                    Depth” Holloway, DeWitt, VLDB’08
    l     Main-memory DSM vs. NSM
                                             “DSM vs. NSM: CPU performance tradeoffs in block-oriented
                                             query processing” Boncz, Zukowski, Nes, DaMoN’08
    l     Flash-disks: a come-back for PAX?                        “Query Processing Techniques
             “Fast Scans and Joins Using Flash                     for Solid State Drives”
             Drives” Shah, Harizopoulos,                           Tsirogiannis, Harizopoulos,
             Wiener, Graefe. DaMoN’08
            VLDB 2009 Tutorial
                                                                   Shah, Wiener, Graefe,
                                            Column-Oriented Database Systems                   19
                                                                   SIGMOD’09
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   Fractured mirrors: a closer look
   l     Store DSM relations inside a B-tree                                                                “A Case For Fractured
                                                                                                            Mirrors” Ramamurthy,
         l       Leaf nodes contain values                                                                  DeWitt, Su, VLDB 2002.
         l       Eliminate IDs, amortize header overhead
         l       Custom implementation on Shore
                                                                                                 sparse
        Tuple           TID       Column
        Header                     Data                                                       B-tree on ID
                        1         a1                                                                 3
                        2         a2
                        3         a3                          1      a1        2      a2        3      a3        4       a4     5   a5

                        4         a4                                            a1      a2 a3                                 a4 a5
                                                                         1                                           4
                        5         a5
                                                          Similar: storage density “Efficient columnar
                                                          comparable               storage in B-trees” Graefe.
                                                          to column stores         Sigmod Record 03/2007.
             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                               20
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     Fractured mirrors: performance
     From PAX paper:                                                                                        column?

                                                                                               time
                                                                                                                      row
                                                            regular DSM
                                                                                                                      column?



                                                                                                            columns projected:
                                                                                                            1    2    3 4 5


                                                                                                                            optimized
 l     Chunk-based tuple merging                                                                                              DSM
       l     Read in segments of M pages
       l     Merge segments in memory
       l     Becomes CPU-bound after 5 pages

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                           21
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                                                                       “Performance Tradeoffs in Read-
   Column-scanner                                                      Optimized Databases”
   implementation                                                      Harizopoulos, Liang, Abadi,
                                                                       Madden, VLDB’06
      row scanner                                                                             column scanner

                                                                                                            Joe 45
                                                                                                            …   …
                      Joe 45
                      …   …                         SELECT name, age
                                                     WHERE age > 40
 apply                                                                                                           S
 predicate(s)
                            S                                                                                        #POS 45
                                                                                 Joe                                 #POS …
                                    Direct I/O                                   Sue
                                                                                 …
                              prefetch ~100ms                                                                 apply
  1 Joe 45                      worth of data                                                           predicate #1    S
  2 Sue 37
  ……     …
                                                                                                            45
                                                                                                            37
                                                                                                            …
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                          22
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   Scan performance
   l     Large prefetch hides disk seeks in columns
   l     Column-CPU efficiency with lower selectivity
   l     Row-CPU suffers from memory stalls                                                                     not shown,
   l     Memory stalls disappear in narrow tuples                                                           details in the paper

   l     Compression: similar to narrow




            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                     23
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                                                                      “Read-Optimized Databases, In-
      Even more results                                               Depth” Holloway, DeWitt, VLDB’08
                                                                                       35
  •     Same engine as before                                           narrow & compressed tuple:
  •     Additional findings                                                  30
                                                                                CPU-bound!
                                                                                                   C-25%
                                                                                       25
                                                                                                   C-10%
                                                                                                   R-50%
                                                                                       20




                                                                                Time (s)
                                                                                       15



                                                                                       10



                                                                                           5
                                 wide attributes:
                                 same as before                                            0
                                                                                               1   2   3    4       5    6    7    8   9   10
                                                                                                                Columns Returned




      Non-selective queries, narrow tuples, favor well-compressed rows
      Materialized views are a win
                                                        Column-joins are
      Scan times determine early materialized joins     covered in part 2!
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                                      24
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   Speedup of columns over rows
                                                                                             “Performance Tradeoffs in Read-
                                                                                             Optimized Databases”
                                                                                             Harizopoulos, Liang, Abadi,
                           cycles per disk byte   144                                        Madden, VLDB’06


                                                  72

          (cpdb)                                  36
                                                                                                  +++
                                                  18
                                                            _ = + ++
                                                   9
                                                        8   12   16       20        24         28           32   36
                                                                      tuple width
   l     Rows favored by narrow tuples and low cpdb
         l      Disk-bound workloads have higher cpdb
             VLDB 2009 Tutorial                                        Column-Oriented Database Systems                25
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    Varying prefetch size
                           no competing
                            disk traffic
                40
                                                                                                     Column 2
   time (sec)




                30
                                                                                                     Column 8
                20                                                                                   Column 16
                                                                                                     Column 48 (x 128KB)
                10
                                                                                                 Row (any prefetch size)
                 0
                     4         8      12          16         20          24         28          32
                               selected bytes per tuple

    l           No prefetching hurts columns in single scans

                 VLDB 2009 Tutorial                                  Column-Oriented Database Systems                      26
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   Varying prefetch size
                                                                           with competing disk traffic
                                                             40            Column, 48                    40



                                                time (sec)
                                                             30            Row, 48                       30

                                                             20                                          20

                                                             10                                          10              Column, 8
                                                                                                                         Row, 8
                                                              0                                             0
                                                                  4     12        20        28                  4   12   20    28
                                                                      selected bytes per tuple

   l     No prefetching hurts columns in single scans
   l     Under competing traffic, columns outperform rows for
         any prefetch size
            VLDB 2009 Tutorial                                        Column-Oriented Database Systems                         27
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                                                              “DSM vs. NSM: CPU performance trade
   CPU Performance                                            offs in block-oriented query processing”
                                                              Boncz, Zukowski, Nes, DaMoN’08
         l      Benefit in on-the-fly conversion between NSM and DSM
         l      DSM: sequential access (block fits in L2), random in L1
         l      NSM: random access, SIMD for grouped Aggregation




             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       28
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   New storage technology: Flash SSDs
      l     Performance characteristics
            l     very fast random reads, slow random writes
            l     fast sequential reads and writes
      l     Price per bit (capacity follows)
            l     cheaper than RAM, order of magnitude more expensive than Disk
      l     Flash Translation Layer introduces unpredictability
            l     avoid random writes!
      l     Form factors not ideal yet
            l     SSD (Ł small reads still suffer from SATA overhead/OS limitations)
            l     PCI card (Ł high price, limited expandability)


      l     Boost Sequential I/O in a simple package
            l     Flash RAID: very tight bandwidth/cm3 packing (4GB/sec inside the box)
      l     Column Store Updates
            l     useful for delta structures and logs
      l     Random I/O on flash fixes unclustered index access
            l     still suboptimal if I/O block size > record size
            l     therefore column stores profit mush less than horizontal stores
      l     Random I/O useful to exploit secondary, tertiary table orderings
            l     the larger the data, the deeper clustering one can exploit

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems       29
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  Even faster column scans on flash SSDs
                                                                                        30K Read IOps, 3K Write Iops
   l     New-generation SSDs                                                            250MB/s Read BW, 200MB/s Write
         l      Very fast random reads, slower random writes
         l      Fast sequential RW, comparable to HDD arrays
   l     No expensive seeks across columns
   l     FlashScan and Flashjoin: PAX on SSDs, inside Postgres
                                                                                        “Query Processing Techniques for
                                                                                        Solid State Drives” Tsirogiannis,
                                                                                        Harizopoulos, Shah, Wiener, Graefe,
                                                                                        SIGMOD’09

                                                                                                      mini-pages with no
                                                                                                      qualified attributes are
                                                                                                      not accessed



             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                            30
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   Column-scan performance over time
       regular DSM (2001)
                                                                                   column-store (2006)      ..to 1.2x slower

                                               from 7x slower




                                              ..to 2x slower
                                                                                                            ..to same




                                                                 and 3x faster!

     optimized DSM (2002)                                                SSD Postgres/PAX (2009)

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                   31
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   Outline
   l     Part 1: Basic concepts — Stavros
         l      Introduction to key features
         l      From DSM to column-stores and performance tradeoffs
         l      Column-store architecture overview
         l      Will rows and columns ever converge?

   l     Part 2: Column-oriented execution — Daniel

   l     Part 3: MonetDB/X100 and CPU efficiency — Peter



             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       32
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   Architecture of a column-store
                            storage layout
   l     read-optimized: dense-packed, compressed
   l     organize in extends, batch updates
   l     multiple sort orders
   l     sparse indexes                         engine
                                      l block-tuple operators

                                      l new access methods

              system-level            l optimized relational operators

    l     system-wide column support
    l     loading / updates
    l     scaling through multiple nodes
    l     transactions / redundancy
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems       33
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                                                                            “C-Store: A Column-Oriented
                                                                            DBMS.” Stonebraker et al.
   C-Store                                                                  VLDB 2005.

   l     Compress columns
   l     No alignment
   l     Big disk blocks
   l     Only materialized views (perhaps many)
   l     Focus on Sorting not indexing
   l     Data ordered on anything, not just time
   l     Automatic physical DBMS design
   l     Optimize for grid computing
   l     Innovative redundancy
   l     Xacts – but no need for Mohan
   l     Column optimizer and executor

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems       34
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   C-Store: only materialized views (MVs)
   l     Projection (MV) is some number of columns from a fact table
   l     Plus columns in a dimension table – with a 1-n join between
         Fact and Dimension table
   l     Stored in order of a storage key(s)
   l     Several may be stored!
   l     With a permutation, if necessary, to map between them
   l     Table (as the user specified it and sees it) is not stored!
   l     No secondary indexes (they are a one column sorted MV plus
         a permutation, if you really want one)
        User view:                                                   Possible set of MVs:
        EMP (name, age, salary, dept)                                MV-1 (name, dept, floor) in floor order
        Dept (dname, floor)                                          MV-2 (salary, age) in age order
                                                                     MV-3 (dname, salary, name) in salary order

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems       35
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   Continuous Load and Query (Vertica)
                   Hybrid Storage Architecture



                          > Write Optimized                                                       > Read Optimized
                            Store (WOS)                                                             Store (ROS)
  Trickle                                                                                           • On disk
   Load                                                                                             • Sorted / Compressed
                                                                      TUPLE MOVER
                                                                       Asynchronous                 • Segmented
                                  A         B         C
                                                                       Data Transfer                • Large data loaded direct



                           §Memory based
                                                                                                            A      B      C
                           §Unsorted / Uncompressed
                           §Segmented
                           §Low latency / Small quick                                                           (A B C | A)
                            inserts
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                            36
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   Loading Data (Vertica)

       > INSERT, UPDATE, DELETE                                                                             Write-Optimized
                                                                                                             Store (WOS)
       > Bulk and Trickle Loads                                                                               In-memory
             §COPY
                                                                                                       Automatic
             §COPY DIRECT                                                                              Tuple Mover

       > User loads data into logical Tables
       > Vertica loads atomically into
         storage
                                                                                                             Read-Optimized
                                                                                                               Store (ROS)
                                                                                                                 On-disk




            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                         37
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   Applications for column-stores
         l      Data Warehousing
                l   High end (clustering)
                l   Mid end/Mass Market
                l   Personal Analytics
         l      Data Mining
                l   E.g. Proximity
         l      Google BigTable
         l      RDF
                l   Semantic web data management
         l      Information retrieval
                l   Terabyte TREC
         l      Scientific datasets
                l   SciDB initiative
                l   SLOAN Digital Sky Survey on MonetDB




             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       38
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   List of column-store systems
         l      Cantor (history)
         l      Sybase IQ
         l      SenSage (former Addamark Technologies)
         l      Kdb
         l      1010data
         l      MonetDB
         l      C-Store/Vertica
         l      X100/VectorWise
         l      KickFire
         l      SAP Business Accelerator
         l      Infobright
         l      ParAccel
         l      Exasol
             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       39
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   Outline
   l     Part 1: Basic concepts — Stavros
         l      Introduction to key features
         l      From DSM to column-stores and performance tradeoffs
         l      Column-store architecture overview
         l      Will rows and columns ever converge?

   l     Part 2: Column-oriented execution — Daniel

   l     Part 3: MonetDB/X100 and CPU efficiency — Peter



             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       40
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   Simulate a Column-Store inside a Row-Store
                                          Date     Store     Product Customer             Price


                                          01/01 BOS Table                     Mesa        $20

                                          01/01 NYC Chair                     Lutz        $13                    Option B:
                                                                                                            Index Every Column
                                          01/01 BOS            Bed          Mudd          $79
       Option A:                                                                                                 Date Index
  Vertical Partitioning

          Date              Store            Product           Customer                  Price
       TID    Value       TID     Value     TID   Value        TID    Value        TID    Value

        1 01/01           1     BOS         1 Table             1    Mesa          1      $20
                                                                                                                 Store Index
        2 01/01           2     NYC         2 Chair             2     Lutz         2      $13

        3 01/01           3     BOS         3 Bed               3    Mudd          3      $79



                                                                                                                    …
             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                          41
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   Simulate a Column-Store inside a Row-Store
                                          Date     Store     Product Customer              Price


                                          01/01 BOS Table                   Mesa          $20

                                          01/01 NYC Chair                    Lutz         $13                    Option B:
                                                                                                            Index Every Column
                                          01/01 BOS            Bed          Mudd          $79
       Option A:                                                                                                 Date Index
  Vertical Partitioning

              Date                    Store          Product        Customer               Price
     Value     StartPos Length      TID    Value    TID    Value     TID   Value     TID     Value

    01/01          1        3       1     BOS       1 Table 1              Mesa       1     $20
                                                                                                                 Store Index
                                    2     NYC       2 Chair 2               Lutz      2     $13

 Can explicitly run-                3     BOS       3 Bed 3                Mudd       3     $79
 length encode date
 “Teaching an Old Elephant New Tricks.”
 Bruno, CIDR 2009.
                                                                                                                    …
             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                          42
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                 Experiments
                 l    Star Schema Benchmark (SSBM)                             Adjoined Dimension Column Index (ADC Index)
                                                                               to Improve Star Schema Query Performance”.
                                                                               O’Neil et. al. ICDE 2008.

                 l    Implemented by professional DBA
                 l    Original row-store plus 2 column-store
                      simulations on same row-store product
                     250.0
                                                                                                     “Column-Stores vs Row-Stores:
                     200.0
                                                                                                     How Different are They Really?”
                                                                                                     Abadi, Hachem, and Madden.
Time (seconds)




                     150.0                                                                           SIGMOD 2008.

                     100.0

                      50.0

                       0.0
                                                   Vertically Partitioned      Row-Store With All
                                Normal Row-Store
                                                         Row-Store                  Indexes
                 Average                25.7                79.9                        221.2

                         VLDB 2009 Tutorial                          Column-Oriented Database Systems                         43
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   What’s Going On? Vertical Partitions
   l     Vertical partitions in row-stores:
         l      Work well when workload is known
         l      ..and queries access disjoint sets of columns
         l      See automated physical design
                                                                                                            Tuple    TID   Column
                                                                                                            Header          Data

                                                                                                                     1
   l     Do not work well as full-columns
                                                                                                                     2
         l      TupleID overhead significant
                                                                                                                     3
         l      Excessive joins
                                                                          Queries touch 3-4 foreign keys in fact table,
                                                                          1-2 numeric columns
   “Column-Stores vs. Row-Stores:                                         Complete fact table takes up ~4 GB
   How Different Are They Really?”                                        (compressed)
   Abadi, Madden, and Hachem.                                             Vertically partitioned tables take up 0.7-1.1
   SIGMOD 2008.                                                           GB (compressed)

             VLDB 2009 Tutorial                                      Column-Oriented Database Systems                          44
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    What’s Going On? All Indexes Case
l    Tuple construction
     l     Common type of query:                                      SELECT store_name, SUM(revenue)
                                                                      FROM Facts, Stores
                                                                      WHERE fact.store_id = stores.store_id
                                                                         AND stores.country = “Canada”
                                                                      GROUP BY store_name


     l     Result of lower part of query plan is a set of TIDs that passed
           all predicates
     l     Need to extract SELECT attributes at these TIDs
            l    BUT: index maps value to TID
            l    You really want to map TID to value (i.e., a vertical partition)
            Tuple construction is SLOW

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems         45
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   So….
   l     All indexes approach is a poor way to simulate a column-store
   l     Problems with vertical partitioning are NOT fundamental
           l    Store tuple header in a separate partition
           l    Allow virtual TIDs
           l    Combine clustered indexes, vertical partitioning
   l     So can row-stores simulate column-stores?
           l    Might be possible, BUT:
                 l Need better support for vertical partitioning at the storage layer
                 l Need support for column-specific optimizations at the executer level
                 l Full integration: buffer pool, transaction manager, ..

           l    When will this happen?                                                        See Part 2, Part 3
                  l   Most promising features = soon                                          for most promising
                                                                                                   features
                  l   ..unless new technology / new objectives change the game
                       (SSDs, Massively Parallel Platforms, Energy-efficiency)
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems              46
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   End of Part 1
   l     Basic concepts — Stavros
         l      Introduction to key features
         l      From DSM to column-stores and performance tradeoffs
         l      Column-store architecture overview
         l      Will rows and columns ever converge?

   l     Part 2: Column-oriented execution — Daniel

   l     Part 3: MonetDB/X100 and CPU efficiency — Peter



             VLDB 2009 Tutorial                                      Column-Oriented Database Systems       47
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   Part 2 Outline

   l         Compression

   l         Tuple Materialization

   l         Joins




            VLDB 2009 Tutorial                                       Column-Oriented Database Systems       48
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                                                                                                             VLDB
                                        Column-Oriented                                                      2009
                                                                                                            Tutorial
                                       Database Systems

                                                                                    Compression
 “Super-Scalar RAM-CPU Cache Compression”
 Zukowski, Heman, Nes, Boncz, ICDE’06

 “Integrating Compression and Execution in Column-
 Oriented Database Systems” Abadi, Madden, and
 Ferreira, SIGMOD ’06

 •Query optimization in compressed database
 systems” Chen, Gehrke, Korn, SIGMOD’01
Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009)




   Compression
      l     Trades I/O for CPU
      l     Increased column-store opportunities:
              l    Higher data value locality in column stores
              l    Techniques such as run length encoding far more
                   useful
              l    Can use extra space to store multiple copies of
                   data in different sort orders




            VLDB 2009 Tutorial                                       Column-Oriented Database Systems       50
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   Run-length Encoding


    Quarter Product ID Price                                                   Quarter                         Product ID               Price
                                                                          (value, start_pos, run_length)    (value, start_pos, run_length)
         Q1                 1                  5
                                                                           (Q1, 1, 300)                            (1, 1, 5)                 5
         Q1                 1                  7
                                                                                                                   (2, 6, 2)                 7
         Q1                 1                  2                           (Q2, 301, 350)                                                    2
         Q1                 1                  9                                                                       …
                                                                           (Q3, 651, 500)                                                    9
         Q1                 1                  6                                                                (1, 301, 3)                  6
         Q1                 2                  8                           (Q4, 1151, 600)                      (2, 304, 1)                  8
         Q1                 2                  5
         …                  …                  …                                                                       …                     5
                                                                                                                                             …
         Q2                 1                  3
                                                                                                                                             3
         Q2                 1                  8
                                                                                                                                             8
         Q2                 1                  1
                                                                                                                                             1
         Q2                 2                  4
         …                  …                  …                                                                                             4
                                                                                                                                             …
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                                        51
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                                           “Integrating Compression and Execution in Column-
                                           Oriented Database Systems” Abadi et. al, SIGMOD ’06

   Bit-vector Encoding

     l     For each unique      Product ID                                                  ID: 1           ID: 2   ID: 3   …
           value, v, in column
           c, create bit-vector    1                                                          1             0        0      0
           b                       1                                                          1             0        0      0
             l   b[i] = 1 if c[i] = v                          1                              1             0        0      0
                                                               1                              1             0        0      0
     l     Good for columns
                                                               1                              1             0        0      0
           with few unique
                                                               2                              0             1        0      0
           values
                                                               2                              0             1        0      0
     l     Each bit-vector                                     …                              …             …        …      …
           can be further                                      1                              1             0        0      0
           compressed if                                       1                              1             0        0      0
           sparse                                              2                              0             1        0      0
                                                               3                              0             0        1      0
                                                               …                              …             …        …      …

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                           52
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                                           “Integrating Compression and Execution in Column-
                                           Oriented Database Systems” Abadi et. al, SIGMOD ’06

   Dictionary Encoding

                                                                                 Quarter
  l     For each                                   Quarter
        unique value                                                                  0                         Quarter
                                                                                      1
        create                                          Q1                            3
        dictionary entry                                                              0                            24
                                                        Q2                            2
  l     Dictionary can                                                                0                           128
                                                        Q4                            0
        be per-block or                                                               0                           122
                                                        Q1                            1
        per-column                                                                    3

  l     Column-stores
                                                        Q3
                                                        Q1
                                                                                      2
                                                                                      2             OR             +
        have the                                        Q1                            +                        Dictionary
        advantage that                                                         Dictionary
        dictionary                                      Q1
                                                                                                             24: Q1, Q2, Q4, Q1
        entries may                                     Q2                         0: Q1                             …
        encode multiple                                 Q4                         1: Q2                    122: Q2, Q4, Q3, Q3
        values at once                                  Q3                         2: Q3                             …
                                                        Q3                         3: Q4                    128: Q3, Q1, Q1, Q1
                                                        …

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                       53
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   Frame Of Reference Encoding
                                                                               Price                        Price
     l     Encodes values as b bit                                                                          Frame: 50
           offset from chosen frame                                             45
                                                                                                              -5
                                                                                54
           of reference                                                                                        4
                                                                                48
     l     Special escape code (e.g.                                                                          -2
                                                                                55                                      4 bits per
           all bits set to 1) indicates                                                                        5        value
                                                                                51
                                                                                                               1
           a difference larger than                                             53
                                                                                                               3
           can be stored in b bits                                              40
                                                                                                              ∞
             l   After escape code,                                             50
                                                                                                              40
                 original (uncompressed)                                        49                                        Exceptions (see
                                                                                                               0          part 3 for a better
                 value is written                                               62                                        way to deal with
                                                                                                              -1          exceptions)
                                                                                52
                                                                                                              ∞
   “Compressing Relations and Indexes                                           50
                                                                                …                             62
   ” Goldstein, Ramakrishnan, Shaft,                                                                           2
   ICDE’98                                                                                                     0
                                                                                                              …
            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                                   54
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   Differential Encoding
                                                                                    Time                    Time
     l     Encodes values as b bit offset
           from previous value
     l     Special escape code (just like                                            5:00                    5:00
           frame of reference encoding)                                              5:02                     2
           indicates a difference larger than
           can be stored in b bits                                                   5:03                     1
                                                                                                                    2 bits per
             l   After escape code, original                                         5:03                     0     value
                 (uncompressed) value is written                                     5:04                     1
     l     Performs well on columns
           containing increasing/decreasing                                          5:06                     2
           sequences                                                                 5:07                     1
             l   inverted lists                                                      5:08                     1
             l   timestamps
             l   object IDs                                                          5:10                     2
                                                                                                                    Exception (see
             l   sorted / clustered columns                                          5:15                    ∞      part 3 for a better
                                                                                                                    way to deal with
                                                                                     5:16                   5:15    exceptions)
      “Improved Word-Aligned Binary                                                  5:16                     1
      Compression for Text Indexing”                                                  …                       0
      Ahn, Moffat, TKDE’06


            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                           55
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   What Compression Scheme To Use?
                                                Does column appear in the sort key?

                                             yes                                    no
                 Is the average                                                                  Are number of unique
                 run-length > 2                                                                     values < ~50000
               yes                no

                                                                                                            yes
                                 Differential
           RLE
                                 Encoding
                                                                      no                 Does this column appear frequently
                                                                                               in selection predicates?


                                                                                                     yes          no
                           Is the data numerical
                         and exhibit good locality?

                        yes                       no
                                                                                            Bit-vector             Dictionary
                                                                                           Compression            Compression
         Frame of Reference                       Leave Data
             Encoding                            Uncompressed

                                                       OR
                                                  Heavyweight
                                                  Compression


            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                           56
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                                                        “Super-Scalar RAM-CPU Cache Compression”
                                                        Zukowski, Heman, Nes, Boncz, ICDE’06
   Heavy-Weight Compression Schemes




   l     Modern disk arrays can achieve > 1GB/s
   l     1/3 CPU for decompression Ł 3GB/s needed
     Ł     Lightweight compression schemes are better
     Ł     Even better: operate directly on compressed data

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems       57
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                                           “Integrating Compression and Execution in Column-
                                           Oriented Database Systems” Abadi et. al, SIGMOD ’06

     Operating Directly on Compressed Data


     l     I/O - CPU tradeoff is no longer a tradeoff
     l     Reduces memory–CPU bandwidth requirements
     l     Opens up possibility of operating on multiple
           records at once




            VLDB 2009 Tutorial                                       Column-Oriented Database Systems       58
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                                           “Integrating Compression and Execution in Column-
                                           Oriented Database Systems” Abadi et. al, SIGMOD ’06

     Operating Directly on Compressed Data
           Quarter                                       Product ID
                                                       1        2         3
                                                       …        …         …
                                                                                                            ProductID, COUNT(*))
      (Q1, 1, 300)                                     1        0         0
                                    301-306            0        0         1                                       (1, 3)
      (Q2, 301, 6)                                     0        1         0
                                                                                                                  (2, 1)
      (Q3, 307, 500)                                   1        0         0
                                                       1        0         0                                       (3, 2)
      (Q4, 807, 600)                                   0        0         1
                                                       0        1         0
                                                                                               SELECT ProductID, Count(*)
                                                       1        0         0
                                                                                               FROM table
                                                       0        0         1                    WHERE (Quarter = Q2)
                                                       0        1         0                    GROUP BY ProductID
         Index Lookup + Offset jump                    0        0         1
                                                       …        …         …

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                              59
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                                           “Integrating Compression and Execution in Column-
                                           Oriented Database Systems” Abadi et. al, SIGMOD ’06

     Operating Directly on Compressed Data
                                                                                                            SELECT ProductID, Count(*)
                                                                     Block API                              FROM table
                                                                                                            WHERE (Quarter = Q2)
                                                         Data                                               GROUP BY ProductID
          Aggregation                                    isOneValue()
           Operator                                      isValueSorted()
                                                         isPosContiguous()
                                                         isSparse()

             Selection                                   getNext()
             Operator                                    decompressIntoArray()                                  (Q1, 1, 300)
                                                         getValueAtPosition(pos)
                                                                                                                (Q2, 301, 6)
                                                         getMin()
         Compression-                                    getMax()                                               (Q3, 307, 500)
          Aware Scan                                     getSize()
                                                                                                                (Q4, 807, 600)
           Operator

            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                            60
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                                                                                                             VLDB
                                        Column-Oriented                                                      2009
                                                                                                            Tutorial
                                       Database Systems
                                    Tuple Materialization and
                              Column-Oriented Join Algorithms
  “Materialization Strategies in a Column-                       “Query Processing Techniques for
  Oriented DBMS” Abadi, Myers, DeWitt,                           Solid State Drives” Tsirogiannis,
  and Madden. ICDE 2007.                                         Harizopoulos Shah, Wiener, and
                                                                 Graefe. SIGMOD 2009.
  “Self-organizing tuple reconstruction in
  column-stores“, Idreos, Manegold,                              “Cache-Conscious Radix-Decluster
  Kersten, SIGMOD’09                                             Projections”, Manegold, Boncz, Nes,
                                                                 VLDB’04
  “Column-Stores vs Row-Stores: How
  Different are They Really?” Abadi,
  Madden, and Hachem. SIGMOD 2008.
Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009)




             When should columns be projected?
             l    Where should column projection operators be placed in a query
                  plan?
                    l    Row-store:
                            l    Column projection involves removing unneeded columns from
                                 tuples
                            l    Generally done as early as possible
                    l    Column-store:
                            l    Operation is almost completely opposite from a row-store
                            l    Column projection involves reading needed columns from storage
                                 and extracting values for a listed set of tuples
                                    §   This process is called “materialization”
                            l    Early materialization: project columns at beginning of query plan
                                    §   Straightforward since there is a one-to-one mapping across columns
                            l    Late materialization: wait as long as possible for projecting columns
                                    §   More complicated since selection and join operators on one column obfuscates
                                        mapping to other columns from same table
                            l    Most column-stores construct tuples and column projection time
                                    §   Many database interfaces expect output in regular tuples (rows)
                                    §   Rest of discussion will focus on this case


            VLDB 2009 Tutorial                                       Column-Oriented Database Systems           62
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             When should tuples be constructed?

                                     Select + Aggregate                                                 QUERY:

                         4       2    2 7                                                               SELECT custID,SUM(price)
                                                                                                        FROM table
                         4       1    3 13                                                              WHERE (prodID = 4) AND
                         4       3    3 42                                                                     (storeID = 1) AND
                                                                                                        GROUP BY custID
                         4       1    3 80

                             Construct                           l     Solution 1: Create rows first (EM).
                                                                       But:
                                                                         l   Need to construct ALL tuples
         (4,1,4)             2        2         7
                             1        3         13                       l   Need to decompress data
                             3        3         42                       l   Poor memory bandwidth
                             1        3         80                           utilization
          prodID        storeID      custID price


            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                       63
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   Solution 2: Operate on columns

                                                                                                        QUERY:
                                                                       1          0
                                                                                                        SELECT custID,SUM(price)
                                                                       1          1
                             AGG                                                                        FROM table
                                                                       1          0                     WHERE (prodID = 4) AND
                                                                       1          1                            (storeID = 1) AND
                     Data               Data                                                            GROUP BY custID
                    Source             Source
                    custID              price
                                                                    Data        Data
                                                                   Source      Source

                              AND
                                                                                                              4      2      2      7
                                                                       4          2                           4      1      3      13
                       Data          Data
                                                                       4          1                           4      3      3      42
                      Source        Source                             4          3                           4      1      3      80
                      prodID        storeID
                                                                       4          1                         prodID storeID custID price
                                                                   prodID      storeID



            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                                 64
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   Solution 2: Operate on columns

                                                                                                        QUERY:

                                                                            0                           SELECT custID,SUM(price)
                             AGG                                                                        FROM table
                                                                            1
                                                                                                        WHERE (prodID = 4) AND
                                                                            0                                  (storeID = 1) AND
                     Data               Data                                1                           GROUP BY custID
                    Source             Source
                    custID              price

                                                                         AND
                              AND
                                                                                                              4      2      2      7
                                                                     1           0                            4      1      3      13
                       Data          Data
                                                                     1           1                            4      3      3      42
                      Source        Source                           1           0                            4      1      3      80
                      prodID        storeID
                                                                     1           1                          prodID storeID custID price




            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                                 65
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   Solution 2: Operate on columns

                                                                                                        QUERY:
                                                                     3              13
                                                                                    1                   SELECT custID,SUM(price)
                             AGG                                     3              80
                                                                                    1                   FROM table
                                                                                                        WHERE (prodID = 4) AND
                                                                                                               (storeID = 1) AND
                                                           2
                                                           0                                  7
                                                                                              0         GROUP BY custID
                     Data               Data
                    Source             Source              3
                                                           1       Data            Data       13
                                                                                              1
                    custID              price                     Source          Source
                                                           3
                                                           0                                  42
                                                                                              0
                                                           3
                                                           1                                  80
                                                                                              1
                              AND                       custID                                price

                                                                                                              4      2      2      7
                                                                             0                                4      1      3      13
                       Data          Data
                                                                             1                                4      3      3      42
                      Source        Source                                   0                                4      1      3      80
                      prodID        storeID
                                                                             1                              prodID storeID custID price




            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                                 66
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   Solution 2: Operate on columns

                                                                                                        QUERY:
                                                                                                        SELECT custID,SUM(price)
                             AGG                                                                        FROM table
                                                                                                        WHERE (prodID = 4) AND
                                                                         3 1
                                                                         1 93                                  (storeID = 1) AND
                     Data               Data                                                            GROUP BY custID
                    Source             Source
                    custID              price


                                                                          AGG
                              AND
                                                                                                              4      2      2      7
                                                                                                              4      1      3      13
                       Data          Data
                                                                     3
                                                                     1              13
                                                                                    1                         4      3      3      42
                      Source        Source                           3
                                                                     1              80
                                                                                    1                         4      1      3      80
                      prodID        storeID
                                                                                                            prodID storeID custID price




            VLDB 2009 Tutorial                                       Column-Oriented Database Systems                                 67
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                                                    “Materialization Strategies in a Column-Oriented DBMS”
                                                    Abadi, Myers, DeWitt, and Madden. ICDE 2007.

      For plans without joins, late materialization
      is a win

                           10                                                                   QUERY:
                            9
                            8                                                                   SELECT C1, SUM(C2)
         Time (seconds)




                            7                                                                   FROM table
                            6                                                                   WHERE (C1 < CONST) AND
                            5
                            4
                                                                                                      (C2 < CONST)
                            3                                                                   GROUP BY C1
                            2
                            1
                                                                                                l    Ran on 2 compressed
                            0
                                 Low selectivity       Medium        High selectivity
                                                                                                     columns from TPC-H
                                                      selectivity                                    scale 10 data
                                      Early Materialization   Late Materialization




                          VLDB 2009 Tutorial                                Column-Oriented Database Systems          68
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores
VLDB 2009 Tutorial on Column-Stores

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VLDB 2009 Tutorial on Column-Stores

  • 1. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) VLDB Column-Oriented 2009 Tutorial Database Systems Part 1: Stavros Harizopoulos (HP Labs) Part 2: Daniel Abadi (Yale) Part 3: Peter Boncz (CWI) VLDB 2009 Tutorial 1 Column-Oriented Database Systems
  • 2. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) What is a column-store? row-store column-store Date Store Product Customer Price Date Store Product Customer Price + easy to add/modify a record + only need to read in relevant data - might read in unnecessary data - tuple writes require multiple accesses => suitable for read-mostly, read-intensive, large data repositories VLDB 2009 Tutorial Column-Oriented Database Systems 2
  • 3. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Are these two fundamentally different? l The only fundamental difference is the storage layout l However: we need to look at the big picture different storage layouts proposed row-stores row-stores++ row-stores++ converge? ‘70s ‘80s ‘90s ‘00s today column-stores new applications new bottleneck in hardware l How did we get here, and where we are heading Part 1 l What are the column-specific optimizations? Part 2 l How do we improve CPU efficiency when operating on Cs Part 3 VLDB 2009 Tutorial Column-Oriented Database Systems 3
  • 4. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Outline l Part 1: Basic concepts — Stavros l Introduction to key features l From DSM to column-stores and performance tradeoffs l Column-store architecture overview l Will rows and columns ever converge? l Part 2: Column-oriented execution — Daniel l Part 3: MonetDB/X100 and CPU efficiency — Peter VLDB 2009 Tutorial Column-Oriented Database Systems 4
  • 5. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Telco Data Warehousing example l Typical DW installation dimension tables account fact table or RAM l Real-world example usage source “One Size Fits All? - Part 2: Benchmarking toll Results” Stonebraker et al. CIDR 2007 star schema QUERY 2 SELECT account.account_number, sum (usage.toll_airtime), sum (usage.toll_price) Column-store Row-store FROM usage, toll, source, account WHERE usage.toll_id = toll.toll_id Query 1 2.06 300 AND usage.source_id = source.source_id Query 2 2.20 300 AND usage.account_id = account.account_id AND toll.type_ind in (‘AE’. ‘AA’) Query 3 0.09 300 AND usage.toll_price > 0 Query 4 5.24 300 AND source.type != ‘CIBER’ AND toll.rating_method = ‘IS’ Query 5 2.88 300 AND usage.invoice_date = 20051013 GROUP BY account.account_number Why? Three main factors (next slides) VLDB 2009 Tutorial Column-Oriented Database Systems 5
  • 6. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Telco example explained (1/3): read efficiency row store column store read pages containing entire rows read only columns needed one row = 212 columns! in this example: 7 columns is this typical? (it depends) caveats: • “select * ” not any faster • clever disk prefetching What about vertical partitioning? • clever tuple reconstruction (it does not work with ad-hoc queries) VLDB 2009 Tutorial Column-Oriented Database Systems 6
  • 7. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Telco example explained (2/3): compression efficiency l Columns compress better than rows l Typical row-store compression ratio 1 : 3 l Column-store 1 : 10 l Why? l Rows contain values from different domains => more entropy, difficult to dense-pack l Columns exhibit significantly less entropy l Examples: Male, Female, Female, Female, Male 1998, 1998, 1999, 1999, 1999, 2000 l Caveat: CPU cost (use lightweight compression) VLDB 2009 Tutorial Column-Oriented Database Systems 7
  • 8. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Telco example explained (3/3): sorting & indexing efficiency l Compression and dense-packing free up space l Use multiple overlapping column collections l Sorted columns compress better l Range queries are faster l Use sparse clustered indexes What about heavily-indexed row-stores? (works well for single column access, cross-column joins become increasingly expensive) VLDB 2009 Tutorial Column-Oriented Database Systems 8
  • 9. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Additional opportunities for column-stores l Block-tuple / vectorized processing l Easier to build block-tuple operators l Amortizes function-call cost, improves CPU cache performance l Easier to apply vectorized primitives l Software-based: bitwise operations l Hardware-based: SIMD Part 3 l Opportunities with compressed columns l Avoid decompression: operate directly on compressed l Delay decompression (and tuple reconstruction) more l Also known as: late materialization in Part 2 l Exploit columnar storage in other DBMS components l Physical design (both static and dynamic) See: Database Cracking, from CWI VLDB 2009 Tutorial Column-Oriented Database Systems 9
  • 10. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Column-Stores vs Row-Stores: How Different are They Effect on C-Store performance Really?” Abadi, Hachem, and Madden. SIGMOD 2008. Average for SSBM queries on C-store original Time (sec) C-store enable late column-oriented enable materialization join algorithm compression & operate on compressed VLDB 2009 Tutorial Column-Oriented Database Systems 10
  • 11. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Summary of column-store key features columnar storage Part 1 header/ID elimination l Storage layout compression Part 2 Part 3 multiple sort orders column operators Part 1 Part 2 avoid decompression l Execution engine Part 2 late materialization vectorized operations Part 3 l Design tools, optimizer VLDB 2009 Tutorial Column-Oriented Database Systems 11
  • 12. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Outline l Part 1: Basic concepts — Stavros l Introduction to key features l From DSM to column-stores and performance tradeoffs l Column-store architecture overview l Will rows and columns ever converge? l Part 2: Column-oriented execution — Daniel l Part 3: MonetDB/X100 and CPU efficiency — Peter VLDB 2009 Tutorial Column-Oriented Database Systems 12
  • 13. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) From DSM to Column-stores TOD: Time Oriented Database – Wiederhold et al. 70s -1985: "A Modular, Self-Describing Clinical Databank System," Computers and Biomedical Research, 1975 More 1970s: Transposed files, Lorie, Batory, Svensson. “An overview of cantor: a new system for data analysis” Karasalo, Svensson, SSDBM 1983 1985: DSM paper “A decomposition storage model” Copeland and Khoshafian. SIGMOD 1985. 1990s: Commercialization through SybaseIQ Late 90s – 2000s: Focus on main-memory performance l DSM “on steroids” [1997 – now] CWI: MonetDB l Hybrid DSM/NSM [2001 – 2004] Wisconsin: PAX, Fractured Mirrors Michigan: Data Morphing CMU: Clotho 2005 – : Re-birth of read-optimized DSM as “column-store” MIT: C-Store CWI: MonetDB/X100 10+ startups VLDB 2009 Tutorial Column-Oriented Database Systems 13
  • 14. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “A decomposition storage The original DSM paper model” Copeland and Khoshafian. SIGMOD 1985. l Proposed as an alternative to NSM l 2 indexes: clustered on ID, non-clustered on value l Speeds up queries projecting few columns l Requires more storage value ID 0100 0962 1000 .. 1 2 3 4 .. VLDB 2009 Tutorial Column-Oriented Database Systems 14
  • 15. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Memory wall and PAX l 90s: Cache-conscious research “Cache Conscious Algorithms for from: Relational Query Processing.” Shatdal, Kant, Naughton. VLDB 1994. “DBMSs on a modern processor: “Database Architecture Optimized for and: Where does time go?” Ailamaki, to: the New Bottleneck: Memory Access.” DeWitt, Hill, Wood. VLDB 1999. Boncz, Manegold, Kersten. VLDB 1999. l PAX: Partition Attributes Across l Retains NSM I/O pattern l Optimizes cache-to-RAM communication “Weaving Relations for Cache Performance.” Ailamaki, DeWitt, Hill, Skounakis, VLDB 2001. VLDB 2009 Tutorial Column-Oriented Database Systems 15
  • 16. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) More hybrid NSM/DSM schemes l Dynamic PAX: Data Morphing “Data morphing: an adaptive, cache-conscious storage technique.” Hankins, Patel, VLDB 2003. l Clotho: custom layout using scatter-gather I/O “Clotho: Decoupling Memory Page Layout from Storage Organization.” Shao, Schindler, Schlosser, Ailamaki, and Ganger. VLDB 2004. l Fractured mirrors l Smart mirroring with both NSM/DSM copies “A Case For Fractured Mirrors.” Ramamurthy, DeWitt, Su, VLDB 2002. VLDB 2009 Tutorial Column-Oriented Database Systems 16
  • 17. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) MonetDB (more in Part 3) l Late 1990s, CWI: Boncz, Manegold, and Kersten l Motivation: l Main-memory l Improve computational efficiency by avoiding expression interpreter l DSM with virtual IDs natural choice l Developed new query execution algebra l Initial contributions: l Pointed out memory-wall in DBMSs l Cache-conscious projections and joins l … VLDB 2009 Tutorial Column-Oriented Database Systems 17
  • 18. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) 2005: the (re)birth of column-stores l New hardware and application realities l Faster CPUs, larger memories, disk bandwidth limit l Multi-terabyte Data Warehouses l New approach: combine several techniques l Read-optimized, fast multi-column access, disk/CPU efficiency, light-weight compression l C-store paper: l First comprehensive design description of a column-store l MonetDB/X100 l “proper” disk-based column store l Explosion of new products VLDB 2009 Tutorial Column-Oriented Database Systems 18
  • 19. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Performance tradeoffs: columns vs. rows DSM traditionally was not favored by technology trends How has this changed? l Optimized DSM in “Fractured Mirrors,” 2002 l “Apples-to-apples” comparison “Performance Tradeoffs in Read- Optimized Databases” Harizopoulos, Liang, Abadi, Madden, VLDB’06 l Follow-up study “Read-Optimized Databases, In- Depth” Holloway, DeWitt, VLDB’08 l Main-memory DSM vs. NSM “DSM vs. NSM: CPU performance tradeoffs in block-oriented query processing” Boncz, Zukowski, Nes, DaMoN’08 l Flash-disks: a come-back for PAX? “Query Processing Techniques “Fast Scans and Joins Using Flash for Solid State Drives” Drives” Shah, Harizopoulos, Tsirogiannis, Harizopoulos, Wiener, Graefe. DaMoN’08 VLDB 2009 Tutorial Shah, Wiener, Graefe, Column-Oriented Database Systems 19 SIGMOD’09
  • 20. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Fractured mirrors: a closer look l Store DSM relations inside a B-tree “A Case For Fractured Mirrors” Ramamurthy, l Leaf nodes contain values DeWitt, Su, VLDB 2002. l Eliminate IDs, amortize header overhead l Custom implementation on Shore sparse Tuple TID Column Header Data B-tree on ID 1 a1 3 2 a2 3 a3 1 a1 2 a2 3 a3 4 a4 5 a5 4 a4 a1 a2 a3 a4 a5 1 4 5 a5 Similar: storage density “Efficient columnar comparable storage in B-trees” Graefe. to column stores Sigmod Record 03/2007. VLDB 2009 Tutorial Column-Oriented Database Systems 20
  • 21. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Fractured mirrors: performance From PAX paper: column? time row regular DSM column? columns projected: 1 2 3 4 5 optimized l Chunk-based tuple merging DSM l Read in segments of M pages l Merge segments in memory l Becomes CPU-bound after 5 pages VLDB 2009 Tutorial Column-Oriented Database Systems 21
  • 22. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Performance Tradeoffs in Read- Column-scanner Optimized Databases” implementation Harizopoulos, Liang, Abadi, Madden, VLDB’06 row scanner column scanner Joe 45 … … Joe 45 … … SELECT name, age WHERE age > 40 apply S predicate(s) S #POS 45 Joe #POS … Direct I/O Sue … prefetch ~100ms apply 1 Joe 45 worth of data predicate #1 S 2 Sue 37 …… … 45 37 … VLDB 2009 Tutorial Column-Oriented Database Systems 22
  • 23. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Scan performance l Large prefetch hides disk seeks in columns l Column-CPU efficiency with lower selectivity l Row-CPU suffers from memory stalls not shown, l Memory stalls disappear in narrow tuples details in the paper l Compression: similar to narrow VLDB 2009 Tutorial Column-Oriented Database Systems 23
  • 24. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Read-Optimized Databases, In- Even more results Depth” Holloway, DeWitt, VLDB’08 35 • Same engine as before narrow & compressed tuple: • Additional findings 30 CPU-bound! C-25% 25 C-10% R-50% 20 Time (s) 15 10 5 wide attributes: same as before 0 1 2 3 4 5 6 7 8 9 10 Columns Returned Non-selective queries, narrow tuples, favor well-compressed rows Materialized views are a win Column-joins are Scan times determine early materialized joins covered in part 2! VLDB 2009 Tutorial Column-Oriented Database Systems 24
  • 25. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Speedup of columns over rows “Performance Tradeoffs in Read- Optimized Databases” Harizopoulos, Liang, Abadi, cycles per disk byte 144 Madden, VLDB’06 72 (cpdb) 36 +++ 18 _ = + ++ 9 8 12 16 20 24 28 32 36 tuple width l Rows favored by narrow tuples and low cpdb l Disk-bound workloads have higher cpdb VLDB 2009 Tutorial Column-Oriented Database Systems 25
  • 26. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Varying prefetch size no competing disk traffic 40 Column 2 time (sec) 30 Column 8 20 Column 16 Column 48 (x 128KB) 10 Row (any prefetch size) 0 4 8 12 16 20 24 28 32 selected bytes per tuple l No prefetching hurts columns in single scans VLDB 2009 Tutorial Column-Oriented Database Systems 26
  • 27. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Varying prefetch size with competing disk traffic 40 Column, 48 40 time (sec) 30 Row, 48 30 20 20 10 10 Column, 8 Row, 8 0 0 4 12 20 28 4 12 20 28 selected bytes per tuple l No prefetching hurts columns in single scans l Under competing traffic, columns outperform rows for any prefetch size VLDB 2009 Tutorial Column-Oriented Database Systems 27
  • 28. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “DSM vs. NSM: CPU performance trade CPU Performance offs in block-oriented query processing” Boncz, Zukowski, Nes, DaMoN’08 l Benefit in on-the-fly conversion between NSM and DSM l DSM: sequential access (block fits in L2), random in L1 l NSM: random access, SIMD for grouped Aggregation VLDB 2009 Tutorial Column-Oriented Database Systems 28
  • 29. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) New storage technology: Flash SSDs l Performance characteristics l very fast random reads, slow random writes l fast sequential reads and writes l Price per bit (capacity follows) l cheaper than RAM, order of magnitude more expensive than Disk l Flash Translation Layer introduces unpredictability l avoid random writes! l Form factors not ideal yet l SSD (Ł small reads still suffer from SATA overhead/OS limitations) l PCI card (Ł high price, limited expandability) l Boost Sequential I/O in a simple package l Flash RAID: very tight bandwidth/cm3 packing (4GB/sec inside the box) l Column Store Updates l useful for delta structures and logs l Random I/O on flash fixes unclustered index access l still suboptimal if I/O block size > record size l therefore column stores profit mush less than horizontal stores l Random I/O useful to exploit secondary, tertiary table orderings l the larger the data, the deeper clustering one can exploit VLDB 2009 Tutorial Column-Oriented Database Systems 29
  • 30. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Even faster column scans on flash SSDs 30K Read IOps, 3K Write Iops l New-generation SSDs 250MB/s Read BW, 200MB/s Write l Very fast random reads, slower random writes l Fast sequential RW, comparable to HDD arrays l No expensive seeks across columns l FlashScan and Flashjoin: PAX on SSDs, inside Postgres “Query Processing Techniques for Solid State Drives” Tsirogiannis, Harizopoulos, Shah, Wiener, Graefe, SIGMOD’09 mini-pages with no qualified attributes are not accessed VLDB 2009 Tutorial Column-Oriented Database Systems 30
  • 31. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Column-scan performance over time regular DSM (2001) column-store (2006) ..to 1.2x slower from 7x slower ..to 2x slower ..to same and 3x faster! optimized DSM (2002) SSD Postgres/PAX (2009) VLDB 2009 Tutorial Column-Oriented Database Systems 31
  • 32. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Outline l Part 1: Basic concepts — Stavros l Introduction to key features l From DSM to column-stores and performance tradeoffs l Column-store architecture overview l Will rows and columns ever converge? l Part 2: Column-oriented execution — Daniel l Part 3: MonetDB/X100 and CPU efficiency — Peter VLDB 2009 Tutorial Column-Oriented Database Systems 32
  • 33. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Architecture of a column-store storage layout l read-optimized: dense-packed, compressed l organize in extends, batch updates l multiple sort orders l sparse indexes engine l block-tuple operators l new access methods system-level l optimized relational operators l system-wide column support l loading / updates l scaling through multiple nodes l transactions / redundancy VLDB 2009 Tutorial Column-Oriented Database Systems 33
  • 34. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “C-Store: A Column-Oriented DBMS.” Stonebraker et al. C-Store VLDB 2005. l Compress columns l No alignment l Big disk blocks l Only materialized views (perhaps many) l Focus on Sorting not indexing l Data ordered on anything, not just time l Automatic physical DBMS design l Optimize for grid computing l Innovative redundancy l Xacts – but no need for Mohan l Column optimizer and executor VLDB 2009 Tutorial Column-Oriented Database Systems 34
  • 35. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) C-Store: only materialized views (MVs) l Projection (MV) is some number of columns from a fact table l Plus columns in a dimension table – with a 1-n join between Fact and Dimension table l Stored in order of a storage key(s) l Several may be stored! l With a permutation, if necessary, to map between them l Table (as the user specified it and sees it) is not stored! l No secondary indexes (they are a one column sorted MV plus a permutation, if you really want one) User view: Possible set of MVs: EMP (name, age, salary, dept) MV-1 (name, dept, floor) in floor order Dept (dname, floor) MV-2 (salary, age) in age order MV-3 (dname, salary, name) in salary order VLDB 2009 Tutorial Column-Oriented Database Systems 35
  • 36. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Continuous Load and Query (Vertica) Hybrid Storage Architecture > Write Optimized > Read Optimized Store (WOS) Store (ROS) Trickle • On disk Load • Sorted / Compressed TUPLE MOVER Asynchronous • Segmented A B C Data Transfer • Large data loaded direct §Memory based A B C §Unsorted / Uncompressed §Segmented §Low latency / Small quick (A B C | A) inserts VLDB 2009 Tutorial Column-Oriented Database Systems 36
  • 37. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Loading Data (Vertica) > INSERT, UPDATE, DELETE Write-Optimized Store (WOS) > Bulk and Trickle Loads In-memory §COPY Automatic §COPY DIRECT Tuple Mover > User loads data into logical Tables > Vertica loads atomically into storage Read-Optimized Store (ROS) On-disk VLDB 2009 Tutorial Column-Oriented Database Systems 37
  • 38. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Applications for column-stores l Data Warehousing l High end (clustering) l Mid end/Mass Market l Personal Analytics l Data Mining l E.g. Proximity l Google BigTable l RDF l Semantic web data management l Information retrieval l Terabyte TREC l Scientific datasets l SciDB initiative l SLOAN Digital Sky Survey on MonetDB VLDB 2009 Tutorial Column-Oriented Database Systems 38
  • 39. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) List of column-store systems l Cantor (history) l Sybase IQ l SenSage (former Addamark Technologies) l Kdb l 1010data l MonetDB l C-Store/Vertica l X100/VectorWise l KickFire l SAP Business Accelerator l Infobright l ParAccel l Exasol VLDB 2009 Tutorial Column-Oriented Database Systems 39
  • 40. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Outline l Part 1: Basic concepts — Stavros l Introduction to key features l From DSM to column-stores and performance tradeoffs l Column-store architecture overview l Will rows and columns ever converge? l Part 2: Column-oriented execution — Daniel l Part 3: MonetDB/X100 and CPU efficiency — Peter VLDB 2009 Tutorial Column-Oriented Database Systems 40
  • 41. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Simulate a Column-Store inside a Row-Store Date Store Product Customer Price 01/01 BOS Table Mesa $20 01/01 NYC Chair Lutz $13 Option B: Index Every Column 01/01 BOS Bed Mudd $79 Option A: Date Index Vertical Partitioning Date Store Product Customer Price TID Value TID Value TID Value TID Value TID Value 1 01/01 1 BOS 1 Table 1 Mesa 1 $20 Store Index 2 01/01 2 NYC 2 Chair 2 Lutz 2 $13 3 01/01 3 BOS 3 Bed 3 Mudd 3 $79 … VLDB 2009 Tutorial Column-Oriented Database Systems 41
  • 42. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Simulate a Column-Store inside a Row-Store Date Store Product Customer Price 01/01 BOS Table Mesa $20 01/01 NYC Chair Lutz $13 Option B: Index Every Column 01/01 BOS Bed Mudd $79 Option A: Date Index Vertical Partitioning Date Store Product Customer Price Value StartPos Length TID Value TID Value TID Value TID Value 01/01 1 3 1 BOS 1 Table 1 Mesa 1 $20 Store Index 2 NYC 2 Chair 2 Lutz 2 $13 Can explicitly run- 3 BOS 3 Bed 3 Mudd 3 $79 length encode date “Teaching an Old Elephant New Tricks.” Bruno, CIDR 2009. … VLDB 2009 Tutorial Column-Oriented Database Systems 42
  • 43. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Experiments l Star Schema Benchmark (SSBM) Adjoined Dimension Column Index (ADC Index) to Improve Star Schema Query Performance”. O’Neil et. al. ICDE 2008. l Implemented by professional DBA l Original row-store plus 2 column-store simulations on same row-store product 250.0 “Column-Stores vs Row-Stores: 200.0 How Different are They Really?” Abadi, Hachem, and Madden. Time (seconds) 150.0 SIGMOD 2008. 100.0 50.0 0.0 Vertically Partitioned Row-Store With All Normal Row-Store Row-Store Indexes Average 25.7 79.9 221.2 VLDB 2009 Tutorial Column-Oriented Database Systems 43
  • 44. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) What’s Going On? Vertical Partitions l Vertical partitions in row-stores: l Work well when workload is known l ..and queries access disjoint sets of columns l See automated physical design Tuple TID Column Header Data 1 l Do not work well as full-columns 2 l TupleID overhead significant 3 l Excessive joins Queries touch 3-4 foreign keys in fact table, 1-2 numeric columns “Column-Stores vs. Row-Stores: Complete fact table takes up ~4 GB How Different Are They Really?” (compressed) Abadi, Madden, and Hachem. Vertically partitioned tables take up 0.7-1.1 SIGMOD 2008. GB (compressed) VLDB 2009 Tutorial Column-Oriented Database Systems 44
  • 45. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) What’s Going On? All Indexes Case l Tuple construction l Common type of query: SELECT store_name, SUM(revenue) FROM Facts, Stores WHERE fact.store_id = stores.store_id AND stores.country = “Canada” GROUP BY store_name l Result of lower part of query plan is a set of TIDs that passed all predicates l Need to extract SELECT attributes at these TIDs l BUT: index maps value to TID l You really want to map TID to value (i.e., a vertical partition) Tuple construction is SLOW VLDB 2009 Tutorial Column-Oriented Database Systems 45
  • 46. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) So…. l All indexes approach is a poor way to simulate a column-store l Problems with vertical partitioning are NOT fundamental l Store tuple header in a separate partition l Allow virtual TIDs l Combine clustered indexes, vertical partitioning l So can row-stores simulate column-stores? l Might be possible, BUT: l Need better support for vertical partitioning at the storage layer l Need support for column-specific optimizations at the executer level l Full integration: buffer pool, transaction manager, .. l When will this happen? See Part 2, Part 3 l Most promising features = soon for most promising features l ..unless new technology / new objectives change the game (SSDs, Massively Parallel Platforms, Energy-efficiency) VLDB 2009 Tutorial Column-Oriented Database Systems 46
  • 47. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) End of Part 1 l Basic concepts — Stavros l Introduction to key features l From DSM to column-stores and performance tradeoffs l Column-store architecture overview l Will rows and columns ever converge? l Part 2: Column-oriented execution — Daniel l Part 3: MonetDB/X100 and CPU efficiency — Peter VLDB 2009 Tutorial Column-Oriented Database Systems 47
  • 48. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Part 2 Outline l Compression l Tuple Materialization l Joins VLDB 2009 Tutorial Column-Oriented Database Systems 48
  • 49. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) VLDB Column-Oriented 2009 Tutorial Database Systems Compression “Super-Scalar RAM-CPU Cache Compression” Zukowski, Heman, Nes, Boncz, ICDE’06 “Integrating Compression and Execution in Column- Oriented Database Systems” Abadi, Madden, and Ferreira, SIGMOD ’06 •Query optimization in compressed database systems” Chen, Gehrke, Korn, SIGMOD’01
  • 50. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Compression l Trades I/O for CPU l Increased column-store opportunities: l Higher data value locality in column stores l Techniques such as run length encoding far more useful l Can use extra space to store multiple copies of data in different sort orders VLDB 2009 Tutorial Column-Oriented Database Systems 50
  • 51. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Run-length Encoding Quarter Product ID Price Quarter Product ID Price (value, start_pos, run_length) (value, start_pos, run_length) Q1 1 5 (Q1, 1, 300) (1, 1, 5) 5 Q1 1 7 (2, 6, 2) 7 Q1 1 2 (Q2, 301, 350) 2 Q1 1 9 … (Q3, 651, 500) 9 Q1 1 6 (1, 301, 3) 6 Q1 2 8 (Q4, 1151, 600) (2, 304, 1) 8 Q1 2 5 … … … … 5 … Q2 1 3 3 Q2 1 8 8 Q2 1 1 1 Q2 2 4 … … … 4 … VLDB 2009 Tutorial Column-Oriented Database Systems 51
  • 52. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Integrating Compression and Execution in Column- Oriented Database Systems” Abadi et. al, SIGMOD ’06 Bit-vector Encoding l For each unique Product ID ID: 1 ID: 2 ID: 3 … value, v, in column c, create bit-vector 1 1 0 0 0 b 1 1 0 0 0 l b[i] = 1 if c[i] = v 1 1 0 0 0 1 1 0 0 0 l Good for columns 1 1 0 0 0 with few unique 2 0 1 0 0 values 2 0 1 0 0 l Each bit-vector … … … … … can be further 1 1 0 0 0 compressed if 1 1 0 0 0 sparse 2 0 1 0 0 3 0 0 1 0 … … … … … VLDB 2009 Tutorial Column-Oriented Database Systems 52
  • 53. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Integrating Compression and Execution in Column- Oriented Database Systems” Abadi et. al, SIGMOD ’06 Dictionary Encoding Quarter l For each Quarter unique value 0 Quarter 1 create Q1 3 dictionary entry 0 24 Q2 2 l Dictionary can 0 128 Q4 0 be per-block or 0 122 Q1 1 per-column 3 l Column-stores Q3 Q1 2 2 OR + have the Q1 + Dictionary advantage that Dictionary dictionary Q1 24: Q1, Q2, Q4, Q1 entries may Q2 0: Q1 … encode multiple Q4 1: Q2 122: Q2, Q4, Q3, Q3 values at once Q3 2: Q3 … Q3 3: Q4 128: Q3, Q1, Q1, Q1 … VLDB 2009 Tutorial Column-Oriented Database Systems 53
  • 54. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Frame Of Reference Encoding Price Price l Encodes values as b bit Frame: 50 offset from chosen frame 45 -5 54 of reference 4 48 l Special escape code (e.g. -2 55 4 bits per all bits set to 1) indicates 5 value 51 1 a difference larger than 53 3 can be stored in b bits 40 ∞ l After escape code, 50 40 original (uncompressed) 49 Exceptions (see 0 part 3 for a better value is written 62 way to deal with -1 exceptions) 52 ∞ “Compressing Relations and Indexes 50 … 62 ” Goldstein, Ramakrishnan, Shaft, 2 ICDE’98 0 … VLDB 2009 Tutorial Column-Oriented Database Systems 54
  • 55. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Differential Encoding Time Time l Encodes values as b bit offset from previous value l Special escape code (just like 5:00 5:00 frame of reference encoding) 5:02 2 indicates a difference larger than can be stored in b bits 5:03 1 2 bits per l After escape code, original 5:03 0 value (uncompressed) value is written 5:04 1 l Performs well on columns containing increasing/decreasing 5:06 2 sequences 5:07 1 l inverted lists 5:08 1 l timestamps l object IDs 5:10 2 Exception (see l sorted / clustered columns 5:15 ∞ part 3 for a better way to deal with 5:16 5:15 exceptions) “Improved Word-Aligned Binary 5:16 1 Compression for Text Indexing” … 0 Ahn, Moffat, TKDE’06 VLDB 2009 Tutorial Column-Oriented Database Systems 55
  • 56. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) What Compression Scheme To Use? Does column appear in the sort key? yes no Is the average Are number of unique run-length > 2 values < ~50000 yes no yes Differential RLE Encoding no Does this column appear frequently in selection predicates? yes no Is the data numerical and exhibit good locality? yes no Bit-vector Dictionary Compression Compression Frame of Reference Leave Data Encoding Uncompressed OR Heavyweight Compression VLDB 2009 Tutorial Column-Oriented Database Systems 56
  • 57. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Super-Scalar RAM-CPU Cache Compression” Zukowski, Heman, Nes, Boncz, ICDE’06 Heavy-Weight Compression Schemes l Modern disk arrays can achieve > 1GB/s l 1/3 CPU for decompression Ł 3GB/s needed Ł Lightweight compression schemes are better Ł Even better: operate directly on compressed data VLDB 2009 Tutorial Column-Oriented Database Systems 57
  • 58. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Integrating Compression and Execution in Column- Oriented Database Systems” Abadi et. al, SIGMOD ’06 Operating Directly on Compressed Data l I/O - CPU tradeoff is no longer a tradeoff l Reduces memory–CPU bandwidth requirements l Opens up possibility of operating on multiple records at once VLDB 2009 Tutorial Column-Oriented Database Systems 58
  • 59. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Integrating Compression and Execution in Column- Oriented Database Systems” Abadi et. al, SIGMOD ’06 Operating Directly on Compressed Data Quarter Product ID 1 2 3 … … … ProductID, COUNT(*)) (Q1, 1, 300) 1 0 0 301-306 0 0 1 (1, 3) (Q2, 301, 6) 0 1 0 (2, 1) (Q3, 307, 500) 1 0 0 1 0 0 (3, 2) (Q4, 807, 600) 0 0 1 0 1 0 SELECT ProductID, Count(*) 1 0 0 FROM table 0 0 1 WHERE (Quarter = Q2) 0 1 0 GROUP BY ProductID Index Lookup + Offset jump 0 0 1 … … … VLDB 2009 Tutorial Column-Oriented Database Systems 59
  • 60. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Integrating Compression and Execution in Column- Oriented Database Systems” Abadi et. al, SIGMOD ’06 Operating Directly on Compressed Data SELECT ProductID, Count(*) Block API FROM table WHERE (Quarter = Q2) Data GROUP BY ProductID Aggregation isOneValue() Operator isValueSorted() isPosContiguous() isSparse() Selection getNext() Operator decompressIntoArray() (Q1, 1, 300) getValueAtPosition(pos) (Q2, 301, 6) getMin() Compression- getMax() (Q3, 307, 500) Aware Scan getSize() (Q4, 807, 600) Operator VLDB 2009 Tutorial Column-Oriented Database Systems 60
  • 61. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) VLDB Column-Oriented 2009 Tutorial Database Systems Tuple Materialization and Column-Oriented Join Algorithms “Materialization Strategies in a Column- “Query Processing Techniques for Oriented DBMS” Abadi, Myers, DeWitt, Solid State Drives” Tsirogiannis, and Madden. ICDE 2007. Harizopoulos Shah, Wiener, and Graefe. SIGMOD 2009. “Self-organizing tuple reconstruction in column-stores“, Idreos, Manegold, “Cache-Conscious Radix-Decluster Kersten, SIGMOD’09 Projections”, Manegold, Boncz, Nes, VLDB’04 “Column-Stores vs Row-Stores: How Different are They Really?” Abadi, Madden, and Hachem. SIGMOD 2008.
  • 62. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) When should columns be projected? l Where should column projection operators be placed in a query plan? l Row-store: l Column projection involves removing unneeded columns from tuples l Generally done as early as possible l Column-store: l Operation is almost completely opposite from a row-store l Column projection involves reading needed columns from storage and extracting values for a listed set of tuples § This process is called “materialization” l Early materialization: project columns at beginning of query plan § Straightforward since there is a one-to-one mapping across columns l Late materialization: wait as long as possible for projecting columns § More complicated since selection and join operators on one column obfuscates mapping to other columns from same table l Most column-stores construct tuples and column projection time § Many database interfaces expect output in regular tuples (rows) § Rest of discussion will focus on this case VLDB 2009 Tutorial Column-Oriented Database Systems 62
  • 63. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) When should tuples be constructed? Select + Aggregate QUERY: 4 2 2 7 SELECT custID,SUM(price) FROM table 4 1 3 13 WHERE (prodID = 4) AND 4 3 3 42 (storeID = 1) AND GROUP BY custID 4 1 3 80 Construct l Solution 1: Create rows first (EM). But: l Need to construct ALL tuples (4,1,4) 2 2 7 1 3 13 l Need to decompress data 3 3 42 l Poor memory bandwidth 1 3 80 utilization prodID storeID custID price VLDB 2009 Tutorial Column-Oriented Database Systems 63
  • 64. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Solution 2: Operate on columns QUERY: 1 0 SELECT custID,SUM(price) 1 1 AGG FROM table 1 0 WHERE (prodID = 4) AND 1 1 (storeID = 1) AND Data Data GROUP BY custID Source Source custID price Data Data Source Source AND 4 2 2 7 4 2 4 1 3 13 Data Data 4 1 4 3 3 42 Source Source 4 3 4 1 3 80 prodID storeID 4 1 prodID storeID custID price prodID storeID VLDB 2009 Tutorial Column-Oriented Database Systems 64
  • 65. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Solution 2: Operate on columns QUERY: 0 SELECT custID,SUM(price) AGG FROM table 1 WHERE (prodID = 4) AND 0 (storeID = 1) AND Data Data 1 GROUP BY custID Source Source custID price AND AND 4 2 2 7 1 0 4 1 3 13 Data Data 1 1 4 3 3 42 Source Source 1 0 4 1 3 80 prodID storeID 1 1 prodID storeID custID price VLDB 2009 Tutorial Column-Oriented Database Systems 65
  • 66. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Solution 2: Operate on columns QUERY: 3 13 1 SELECT custID,SUM(price) AGG 3 80 1 FROM table WHERE (prodID = 4) AND (storeID = 1) AND 2 0 7 0 GROUP BY custID Data Data Source Source 3 1 Data Data 13 1 custID price Source Source 3 0 42 0 3 1 80 1 AND custID price 4 2 2 7 0 4 1 3 13 Data Data 1 4 3 3 42 Source Source 0 4 1 3 80 prodID storeID 1 prodID storeID custID price VLDB 2009 Tutorial Column-Oriented Database Systems 66
  • 67. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) Solution 2: Operate on columns QUERY: SELECT custID,SUM(price) AGG FROM table WHERE (prodID = 4) AND 3 1 1 93 (storeID = 1) AND Data Data GROUP BY custID Source Source custID price AGG AND 4 2 2 7 4 1 3 13 Data Data 3 1 13 1 4 3 3 42 Source Source 3 1 80 1 4 1 3 80 prodID storeID prodID storeID custID price VLDB 2009 Tutorial Column-Oriented Database Systems 67
  • 68. Re-use permitted when acknowledging the original © Stavros Harizopoulos, Daniel Abadi, Peter Boncz (2009) “Materialization Strategies in a Column-Oriented DBMS” Abadi, Myers, DeWitt, and Madden. ICDE 2007. For plans without joins, late materialization is a win 10 QUERY: 9 8 SELECT C1, SUM(C2) Time (seconds) 7 FROM table 6 WHERE (C1 < CONST) AND 5 4 (C2 < CONST) 3 GROUP BY C1 2 1 l Ran on 2 compressed 0 Low selectivity Medium High selectivity columns from TPC-H selectivity scale 10 data Early Materialization Late Materialization VLDB 2009 Tutorial Column-Oriented Database Systems 68