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APOPTOSIS 
DR.AYESHA FARHEEN
Objectives 
Definition of 
Apoptosis 
Process 
Differentiation 
from Necrosis 
Pathways 
Applied 
Aspect
APOPTOSIS 
Greek word : Falling leaves (like in Autumn) 
In the human body about 100,000 cells are produced every second by mitosis and a 
similar number die by apoptosis !!!
History 
 Apoptotic principle was first described by KARL VOGT in 1842 
 “APOPTOSIS” term was coined by JAMES CORMACK 
 2002 NOBEL PRIZE IN MEDICINE was awarded to SYDNEY 
BRENNER,HORVITZ and JOHN.E.SULSTON for their work in identifying genes 
that control Apoptosis. 
John E Sulton won Nobel Prize in 2002 
for his pioneering research in Apoptosis
PROGRAMMED CELL DEATH 
CELL SUICIDE
What is Apoptosis? 
 DEFINITION : Apoptosis is a peculiar well controlled individual cell death that is 
caspase mediated and leads to fragmentation of the cell and organelles into 
numerous small buds, which are then engulfed by macrophages without 
surrounding inflammation 
An orderly 
disposal of cells 
that need to die 
DNA has 
sustained too 
many injuries 
Cell is infected 
with a virus 
Cell is just too 
old and ’ its 
time has come’ 
Cell needs to be 
removed for 
body parts to 
be formed
Most of the embryo development involves programmed cell death 
The tail of a tadpole is absorbed via apoptosis.
Importance of Apoptosis 
1) Crucial for embryonic development 
-Errors in Apoptosis can lead to Birth Defects 
2) Important for maintaining homeostasis 
- Cell death is balanced with mitosis to regulate cell number. 
3) Improper regulation contributes to human disease 
- Neurodegenerative diseases 
Parkinson’s 
Alzheimer’s 
- Cancer 
- Autoimmune diseases e.g. (diabetes type I) 
- Viral diseases
What is Apoptosis NOT? 
 Apoptosis is NOT cell death after injury 
Cell death after injury is called NECROSIS 
Cells die by one of two mechanisms – necrosis or apoptosis 
Two physiologically different processes 
– Necrosis – death by injury 
– Apoptosis – death by suicide 
Apoptosis and necrosis have different characteristics
How Apoptosis Differs from Necrosis? 
1. Apoptosis is intrinsically controlled, necrosis is not 
2. Apoptosis is more rapid (12-24 hours) than necrosis 
3. Apoptosis is induced by endogenous or exogenous stimuli, necrosis is always induced by 
exogenous harms 
4. Apoptosis is limited to single or few cells at a time, and occurs among healthy cell 
population, necrosis is usually more extensive & occurs in tissue exposed to injuries 
5. Cell cytoplasm shrinks in apoptosis and swells in necrosis. 
6. Nucleosomes of apoptotic cells are 180 bp fragments, contrary to the irregular ones in 
necrosis 
7. Apoptosis has no inflammation, while necrosis leads to liberation of pro-inflammatory 
mediators 
8. Apoptosis has no systemic manifestations contrary to most inflammations
What happens during Apoptosis? 
Cell shrinkage 
(condensation of 
cytoplasm) 
A programmed 
series of events 
occur 
Breakdown of 
mitochondria; 
release of 
cytochrome C 
Nuclear 
condensation 
Nuclear 
fragmentation
Cellular changes associated with apoptosis
Biochemical features of Apoptosis 
• By activation of caspases 
• Caspases activate DNAses 
Protein 
Cleavage 
• Cleavage into oligonucleosomes 
• By Ca2+-and Mg2+-dependent 
endonucleases 
DNA 
Breakdown 
• Phosphatidylserine 
• Thrombospondin 
Phagocytic 
Recognition
Mechanisms of Apoptosis
Mechanisms of Apoptosis 
Active cysteine residue in the catalytic site 
Specificity in cleavage after an Asp residue 
Synthesized as inactive zymogens (PROCASPASES)
 Digestion of DNA starts after 
2 hrs 
 3&4 hrs after initiation of apoptosis DNA is almost all 
degraded 
 DNA is fragmented with restriction endonucleases 
 Apoptosis induces 180 bp Laddering of DNA
• DNA cleaved into non-random fragments 
• 180-200 bp fragments & multiples of this unit
Mechanism 
Four stages of apoptosis have been defined: 
i. Commitment to death by extracellular or intracellular triggers/signals 
ii. Cell killing (execution) by activation of intracellular proteases (caspases) 
iii. Engulfment of cell corpse by other cells 
iv. Degradation of the cell corpse within the lysosomes of phagocytic cells
DAMAGE Physiological death signals 
DEATH SIGNAL 
PROAPOPTOTIC 
PROTEINS 
ANTIAPOPTOTIC 
PROTEINS
APOPTOSIS 
MITOCHONDRIAL SIGNALS
Stimuli for Apoptotic Cell Death in Mammals 
i. Growth factor deficiencies 
ii. Ionizing radiation/ viral infection 
iii. Free radical toxicity 
iv. Death receptor activation (such as Fas or CD95 triggering) 
v. Metabolic or cell cycle disturbance
Stimuli for Apoptotic Cell Death
Death Factors 
Definition: Cytokines that activate an apoptosis program by binding to their 
specific receptor. Typical examples of death factors are: 
1. Fas ligand, 
2. TNF (tumor necrosis factor) and 
3. TRAIL (TNF-related apoptosis-inducing ligand). 
- Apoptosis can also be induced by cytotoxic T-lymphocytes using the enzyme 
granzyme.
Apoptosis 
Extrinsic 
pathway 
Intrinsic 
pathway 
Granzyme 
pathway
Extrinsic pathway 
Fas engagement. FADD= Fas associated 
death domain.
Extrinsic pathway
Intrinsic Pathway 
AIF= Apoptosis inhibitory factor; IAPs= 
Inhibitors of apoptosis proteins; Apaf- 
1= apoptosis protease activating factor
Intrinsic Pathway
 Bcl2 was the first apoptosis-related gene ,recognized to play a role tumor genesis 
 BCL-2 is a human proto-oncogene located on chromosome 18. 
 Its product is an integral membrane protein (called Bcl-2) located in the membranes of the endoplasmic 
reticulum , nuclear envelope, and in the outer membrane of mitochondria. 
 The gene was discovered as the translocated locus in a B-cell leukemia (hence the name). This 
translocation is also found in some B-cell lymphomas
Apoptosis and Cancer
Apoptosis and Cancer 
• Apoptosis does not occur in Cancer 
• Cancerous cells trick and skip Apoptosis in number of ways 
 Inactivation of p53 [shooting the guard] 
 Produce Bcl-2 or a protein which mimics Bcl-2 
 Inhibits expression of Apaf-1
Apoptosis and Autoimmune Disease 
Autoimmune 
Lymph Proliferative 
Syndrome[ALPS] 
Apoptosis doesnot 
occur in self 
reactive T & B cells 
RBC 
Hemolytic 
Anemia 
Neutrophil 
Neutropenia 
Platelets 
Thrombocyto 
penia
Apoptosis and HIV 
Infected CD4 
cell induces 
Apoptosis in 
surrounding 
cells 
• Deactivated 
Bcl-2 
• Decreases 
CD4 
Glycoprotein 
markers on 
innocent T 
cells ,getting 
them killed 
Infected CD4 cell 
avoids Apoptosis in 
itself 
Decreases 
Phosphatdylserine 
marker for itself 
allowing longer 
survival.
Overview 
Apoptosis is a good thing 
Too little of a good thing is 
bad [Cancer] 
Too much of a good thing is 
also bad [HIV]
Sources 
 Textbook of Medical Physiology –Guyton & Hall [12th edition] 
 Review of Medical Physiology-William F Ganong [24th edition] 
 Internet Sources : 
• www.ncbi.nlm.nih.gov/books/NBK26873 
• http://en.wikipedia.org/wiki/Apoptosis 
Articles : 
Apoptosis- Molecular mechanisms and Pathogenicity 
http://link.springer.com/article/10.1023/A:1009616228304#pg2 
http://www.excli.de/vol8/Rastogi_08_2009/Rastogi_030809_proof.pdf
” 
“ 
Queries?
THANK YOU

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Apoptosis

  • 2. Objectives Definition of Apoptosis Process Differentiation from Necrosis Pathways Applied Aspect
  • 3. APOPTOSIS Greek word : Falling leaves (like in Autumn) In the human body about 100,000 cells are produced every second by mitosis and a similar number die by apoptosis !!!
  • 4. History  Apoptotic principle was first described by KARL VOGT in 1842  “APOPTOSIS” term was coined by JAMES CORMACK  2002 NOBEL PRIZE IN MEDICINE was awarded to SYDNEY BRENNER,HORVITZ and JOHN.E.SULSTON for their work in identifying genes that control Apoptosis. John E Sulton won Nobel Prize in 2002 for his pioneering research in Apoptosis
  • 5. PROGRAMMED CELL DEATH CELL SUICIDE
  • 6. What is Apoptosis?  DEFINITION : Apoptosis is a peculiar well controlled individual cell death that is caspase mediated and leads to fragmentation of the cell and organelles into numerous small buds, which are then engulfed by macrophages without surrounding inflammation An orderly disposal of cells that need to die DNA has sustained too many injuries Cell is infected with a virus Cell is just too old and ’ its time has come’ Cell needs to be removed for body parts to be formed
  • 7. Most of the embryo development involves programmed cell death The tail of a tadpole is absorbed via apoptosis.
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  • 9. Importance of Apoptosis 1) Crucial for embryonic development -Errors in Apoptosis can lead to Birth Defects 2) Important for maintaining homeostasis - Cell death is balanced with mitosis to regulate cell number. 3) Improper regulation contributes to human disease - Neurodegenerative diseases Parkinson’s Alzheimer’s - Cancer - Autoimmune diseases e.g. (diabetes type I) - Viral diseases
  • 10. What is Apoptosis NOT?  Apoptosis is NOT cell death after injury Cell death after injury is called NECROSIS Cells die by one of two mechanisms – necrosis or apoptosis Two physiologically different processes – Necrosis – death by injury – Apoptosis – death by suicide Apoptosis and necrosis have different characteristics
  • 11.
  • 12. How Apoptosis Differs from Necrosis? 1. Apoptosis is intrinsically controlled, necrosis is not 2. Apoptosis is more rapid (12-24 hours) than necrosis 3. Apoptosis is induced by endogenous or exogenous stimuli, necrosis is always induced by exogenous harms 4. Apoptosis is limited to single or few cells at a time, and occurs among healthy cell population, necrosis is usually more extensive & occurs in tissue exposed to injuries 5. Cell cytoplasm shrinks in apoptosis and swells in necrosis. 6. Nucleosomes of apoptotic cells are 180 bp fragments, contrary to the irregular ones in necrosis 7. Apoptosis has no inflammation, while necrosis leads to liberation of pro-inflammatory mediators 8. Apoptosis has no systemic manifestations contrary to most inflammations
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  • 14. What happens during Apoptosis? Cell shrinkage (condensation of cytoplasm) A programmed series of events occur Breakdown of mitochondria; release of cytochrome C Nuclear condensation Nuclear fragmentation
  • 15. Cellular changes associated with apoptosis
  • 16. Biochemical features of Apoptosis • By activation of caspases • Caspases activate DNAses Protein Cleavage • Cleavage into oligonucleosomes • By Ca2+-and Mg2+-dependent endonucleases DNA Breakdown • Phosphatidylserine • Thrombospondin Phagocytic Recognition
  • 18. Mechanisms of Apoptosis Active cysteine residue in the catalytic site Specificity in cleavage after an Asp residue Synthesized as inactive zymogens (PROCASPASES)
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  • 21.  Digestion of DNA starts after 2 hrs  3&4 hrs after initiation of apoptosis DNA is almost all degraded  DNA is fragmented with restriction endonucleases  Apoptosis induces 180 bp Laddering of DNA
  • 22. • DNA cleaved into non-random fragments • 180-200 bp fragments & multiples of this unit
  • 23.
  • 24. Mechanism Four stages of apoptosis have been defined: i. Commitment to death by extracellular or intracellular triggers/signals ii. Cell killing (execution) by activation of intracellular proteases (caspases) iii. Engulfment of cell corpse by other cells iv. Degradation of the cell corpse within the lysosomes of phagocytic cells
  • 25. DAMAGE Physiological death signals DEATH SIGNAL PROAPOPTOTIC PROTEINS ANTIAPOPTOTIC PROTEINS
  • 27. Stimuli for Apoptotic Cell Death in Mammals i. Growth factor deficiencies ii. Ionizing radiation/ viral infection iii. Free radical toxicity iv. Death receptor activation (such as Fas or CD95 triggering) v. Metabolic or cell cycle disturbance
  • 28. Stimuli for Apoptotic Cell Death
  • 29. Death Factors Definition: Cytokines that activate an apoptosis program by binding to their specific receptor. Typical examples of death factors are: 1. Fas ligand, 2. TNF (tumor necrosis factor) and 3. TRAIL (TNF-related apoptosis-inducing ligand). - Apoptosis can also be induced by cytotoxic T-lymphocytes using the enzyme granzyme.
  • 30. Apoptosis Extrinsic pathway Intrinsic pathway Granzyme pathway
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  • 33. Extrinsic pathway Fas engagement. FADD= Fas associated death domain.
  • 35.
  • 36. Intrinsic Pathway AIF= Apoptosis inhibitory factor; IAPs= Inhibitors of apoptosis proteins; Apaf- 1= apoptosis protease activating factor
  • 38.
  • 39.  Bcl2 was the first apoptosis-related gene ,recognized to play a role tumor genesis  BCL-2 is a human proto-oncogene located on chromosome 18.  Its product is an integral membrane protein (called Bcl-2) located in the membranes of the endoplasmic reticulum , nuclear envelope, and in the outer membrane of mitochondria.  The gene was discovered as the translocated locus in a B-cell leukemia (hence the name). This translocation is also found in some B-cell lymphomas
  • 41.
  • 42. Apoptosis and Cancer • Apoptosis does not occur in Cancer • Cancerous cells trick and skip Apoptosis in number of ways  Inactivation of p53 [shooting the guard]  Produce Bcl-2 or a protein which mimics Bcl-2  Inhibits expression of Apaf-1
  • 43. Apoptosis and Autoimmune Disease Autoimmune Lymph Proliferative Syndrome[ALPS] Apoptosis doesnot occur in self reactive T & B cells RBC Hemolytic Anemia Neutrophil Neutropenia Platelets Thrombocyto penia
  • 44. Apoptosis and HIV Infected CD4 cell induces Apoptosis in surrounding cells • Deactivated Bcl-2 • Decreases CD4 Glycoprotein markers on innocent T cells ,getting them killed Infected CD4 cell avoids Apoptosis in itself Decreases Phosphatdylserine marker for itself allowing longer survival.
  • 45. Overview Apoptosis is a good thing Too little of a good thing is bad [Cancer] Too much of a good thing is also bad [HIV]
  • 46. Sources  Textbook of Medical Physiology –Guyton & Hall [12th edition]  Review of Medical Physiology-William F Ganong [24th edition]  Internet Sources : • www.ncbi.nlm.nih.gov/books/NBK26873 • http://en.wikipedia.org/wiki/Apoptosis Articles : Apoptosis- Molecular mechanisms and Pathogenicity http://link.springer.com/article/10.1023/A:1009616228304#pg2 http://www.excli.de/vol8/Rastogi_08_2009/Rastogi_030809_proof.pdf