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1
Presented by
Dr. Shrikant Sonune
Guided by
Dr Ashok Patil,
Dr Shilpa Kandalgaonkar,
Dr Mayur Chaudhary,
Dr Suyog Tupsakhare,
Dr Mahesh Gabhane.
Immunohistochemical
technique (part II)
Historical aspect
Fixation for IHC
Antigen retrieval
Labels
Control
• 1941: Coons et all. have demonsrated antigens on tissue
sections by using an antibody which was linked to an florescent
label.
• 1966: Nakane and Pierce as well as Avrameas and Uriel
reported the use of secondary antibody which was conjugated
with peroxidase enzyme.
• 1970 : Sternberger et al described the peroxidase-
antiperoxidase technique.
• 1971: Envall & Perlman reported the use of alkaline
phosphatase labeling
• 1975: Kohler & Milstein described a revolutionary
method for production of monoclonal antibodies
• 1976 : Huang et al described the use of trypsin
digestion on paraffin sections as a means of reveling
some antigens otherwise masked by formalin fixation &
paraffin processing.
• 1977:Heggness & Ash proposed the use of avidin –
biotin for immunofluorescence.
• 1979: Sternberger described the peroxidase-antiperoxidase
method.
• 1981: Hsu et all. have defined the method of avidin-biotin-
peroxidase complex which is abbreviated as ABC method.
• 1984 : Alkaline phosphatase anti alkaline phosphatase
technique using a red reaction product.
• 1993: Advent of one step system, based on a two layer
dextran polymer. Reported by Pluzek et al at UK pathological
society meeting.
1994 : Norton reported that the stainless steel
pressure cooker was more efficient than the
microwave oven for retrieving some antigens & this
was conformed by Miller et al.
1998: Dako launched a new labeling system based
on the dextran polymer technology.
• Intercellular antigens,
• Cell surface antigens,
• Tissue antigen for
diagnosing autoimmune
diseases
• Protein hormones in
histopathological diagnosis
• Soluble antigens of the cell
• Diagnosis of the endocrine
tumors
• Small amounts of peptides
in endocrine or
neuroendocrine cells
• Immunodeposits
• Tumoral markers
• Tumor typing
1. Fixation
Fresh unfixed, fixed, or formalin fixation and
paraffin embedding
2. Sectioning
Tissue
preparation
1. Antigen retrieval
Proteolytic enzyme method and Heat-induced method
2. Inhibition of endogenous tissue components
3% H2O2
Pretreatment
Make a selection based on the type of specimen,
the primary antibody, the degree of sensitivity and
the processing time required.
Staining
The requirements of a fixative vary according to the
different techniques employed
 Blood smears are preserved by air-drying.
 The subsequent fixation method used depends upon the
staining technique.
 Routine air-drying for 1–2 hours does not have a
deleterious effect on most antigens studied
immunocytochemically.
 Routine air-drying for 1–2 hours does not have a
deleterious effect on most antigens studied
immunocytochemically.
Most cytology smears are immediately fixed in 95%
ethanol or are spray-fixed with a carbowax
containing alcoholic fluid.
Ethanol fixation prevents staining for most leukocyte
markers, such as T and B cell antigens.
Two preparations can be made,
 one wet-fixed
 one air-dried.
With wet-fixed smears, one of the main problems is
the loss of cells, particularly clumps, during the
Immunostaning incubations.
Cryostat sections give much better antigen
preservation than paraffin sections.
Additionally, fixative can be used with cryostat
sections,
Different and optimal fixative for each antigen,
The most popular fixatives contain
 Formalin (40% w/v formaldehyde in water),
 A neutral salt to maintain tonicity
 A buffering system to maintain pH.
Well tolerated by tissues
Have good penetration.
Generally formalin-based fixatives are excellent for
most Immunostaning procedure.
 Formaldehyde fixes tissue by reacting primarily with
basic amino acids to form cross-linking “methylene
bridges.”
 Relatively low permeability to macromolecules and that
the structures of intracytoplasmic proteins are not
significantly altered.
 The great variation in time and conditions for fixation
that cause majority of problems in immunochemistry.
Many antigens can be demonstrated after the use of
appropriate pretreatment methods,
Such as proteolytic enzyme digestion and/or antigen
retrieval, particularly if polyclonal antisera are used.
If monoclonal antibodies are to be utilized on
formalin-fixed, paraffin-embedded tissue sections,
then
 Does formaldehyde react with the epitope under
investigation?
 Does it react with adjacent amino acids causing
conformational changes?
 Does paraffin processing destroy the epitope under
investigation?
If there are conformational changes resulting from
the reaction of formaldehyde with amino acids
adjacent to the epitope,
These can often be reversed using proteolytic
enzyme digestion or antigen retrieval.
If there are conformational changes in the epitope
due to tissue processing, these are irreversible.
Many epitopes are sensitive to heat, and during the
paraffin-embedding step, tissues are heated to the
melting point of wax, usually between 50–60°C.
 Saturated (1.2% w/v) aqueous picric acid 75 mL
 Formalin (40% w/v formaldehyde) 25 mL
 Glacial acetic acid 5 mL
 A saturated solution (w/v) contains 1.17 g/100 mL
distilled water.
This fixative penetrates rapidly and fixes all tissues very
well,
 Fixation time is 1–12 hours
 Lipid-containing antigens may be affected.
 Tissues fixed in Bouin’s solution must be washed in
70% ethanol to precipitate soluble picrates prior to
aqueous washes.
 After cutting sections, the yellow color in the tissue can
be removed by treatment with 5% (w/v) sodium
thiosulfate, followed by a water wash.
To improve cytological preservation and minimize
distortion associated with formaldehyde-based
fixatives, mercuric chloride-based fixatives are used.
These fluids are generally poor penetrators and are
not well tolerated by the tissues.
Frequently, mercuric chloride-based fixatives are
used secondarily to formalin.
Tissues are initially fixed in formal saline or neutral
buffered formalin.
Tissues are then immersed in the mercuric chloride-
containing fluid for a further period of fixation.
Mercuric chloride-containing fixatives are additive
and coagulative.
Suitable for the demonstration of intracytoplasmic
antigens.
The permeability of the tissue is greater
Coagulant fixatives,
Antibody penetration is better,
Resulting in a more intense Immunostaning.
These fixatives are also having additive effect.
 B5 is widely advocated for the fixation of lymph node
Biopsies
B5 STOCK SOLUTION
 Mercuric chloride 2 g
 Sodium acetate 2.5 g
 Distilled water 200 mL
B5 WORKING SOLUTION
 B5 Stock solution 20 mL
 Formalin (40% w/v formaldehyde) 2 mL
ZENKER’S STOCK
SOLUTION
 Mercuric chloride 50 g
 Potassium dichromate 25 g
 Sodium sulfate 10 g
 Distilled water to 1 liter
ZENKER’S WORKING
SOLUTION
 Zenker’s stock solution 100
mL
 Glacial acetic acid 5 mL
CLEARING SOLUTION A
 Iodine 0.5 g
 70% ethanol 100 mL
CLEARING SOLUTION B
 Sodium thiosulfate 5% (w/v)
in distilled water
Morphological detail is generally well preserved,
Penetration is poor
Fixation time is 2–15 hours at room temperature,
Sections are washed in running water for at least 1
hour to remove potassium dichromate deposits.
 The tissue is then dehydrated using clearing agent A,
helps to remove mercuric deposits prior to sectioning.
 After cutting sections and collecting on clean glass
slides,
 The tissue again incubated in clearing solution A for 1–2
minutes.
 Sections are rinsed in water, and placed in clearing
solution for 1–2 minutes.
This fixative is becoming increasingly popular, partly
because it preserves membrane proteins.
Zinc chloride 500 g
Formalin (40% w/v formaldehyde) 3 L
Glacial acetic acid 19 mL
Distilled water 20 L
WORKING SOLUTION
 3% (w/v) Paraformaldehyde 50 mL M
 Disodium hydrogen orthophosphate 100 mL
 Lysine 0.9 g
 Sodium periodate 0.15 g
 Adjust to pH 7.4.
First described by McLean and Nakane
Preserve the micro anatomical relationship of cells
and cytological details.
Since the periodate oxidizes sugars to produce
aldehydes which are cross linked with lysine.
The paraformaldehyde stabilizes proteins.
A recent modification to this solution involves the
addition of potassium dichromate (PLDP).
This chemical is added to preserve lipids and the
fixative should therefore preserve all protein,
carbohydrate and lipid antigenic determinants.
It must be noted, however, that since additive
compounds are formed, immunoreactivity may be
blocked.
Furthermore, cytological detail is not as good as
with other fluids.
Sainte-Marie first described the use of alcohol
fixation and paraffin processing for
immunocytochemistry.
Small pieces of tissue are fixed rapidly and show
good cytological preservation.
They are in some ways ideal fixatives for
immunocytochemistry.
Since alcohols are coagulant fluids and do not form
additive compounds,
They permit good antibody penetration and do not
block immunoreactive determinants.
Conformational changes can occur.
Alcohols precipitate carbohydrates
Hence, useful for surface membrane antigens,
which often display carbohydrate-containing
epitopes.
Applied to frozen sections or smears.
Proteolytic digestion or antigen retrieval is of no use
following alcohol fixation
Ethanol fixation results in destruction of the tissue
section or smear.
 Acetone is an excellent preservative of immunoreactive
sites, leaving most sites intact.
 But it is a very poor penetrator.
 It is used only for smears and cryostat sections.
 Fixation is not complete, and extended incubation in
buffers may result in chromatolysis and loss of
membranes.
The dilemma of trying to obtain good morphological
preservation while maintaining immunoreactivity is
even more apparent in ultra structural
immunochemical studies.
For routine electron microscopy, it is usual to
employ glutaraldehyde primary fixation followed by
post fixation in osmium tetra oxide.
This combination produces excellent ultra structural
detail with good preservation of membranes.
With immunochemistry, however, the combination of
glutaraldehyde and osmium tetra oxide is not
generally useful.
Pre treatment of ultrathin sections with hydrogen
peroxide or sodium metaperiodate to counteract the
deleterious effects of osmium.
The glutaraldehyde primary fixation is not suitable
for many antigens, at least when employing the
concentrations of glutaraldehyde used for routine
electron microscopy.
WORKING SOLUTION
0.2 M Phosphate buffer, pH 7.4 50 mL
8% (w/v) Paraformaldehyde 25 mL
25% (w/v) Glutaraldehyde 0.8 mL
Distilled water 24.2 mL
If the tissue is frozen
The sections may need to be used in
immunohistochemistry
Acetone fixed:
- precipitates proteins onto cell surface---may extract lipids
- is needed for many of the “CD” antibodies
Unfixed:
Advantage: antigens are unaltered
Disadvantage: sections may fall off slide during staining
Paraformaldehyde fixed:
- needs to be freshly made, or frozen soon after
- Deparaffinize ( remove the infiltrated paraffin wax, by using organic solvents)
- The section then needs to be rehydrated, by sequential immersion
in graded alcohols (100%, 70% , 50% and then PBS)
- The deparaffinized section may need to be treated to expose buried
antigenic epitopes with either proteases or by heating in low pH citrate
buffer , or high pH EDTA buffer (Antigen Retrieval)
If the tissue is paraffin embedded
The loss of immunoreactivity by many antigens
caused as a result of fixation in formalin.
Hence many challenges for doing IHC in such cases
 Epitopes 2 types
 Formalin resistant- even after routine formalin fixation
this type of epitopes remains unchanged
 Formalin sensitive- after routine formalin fixation this
type of epitopes shows substantial changes. It can be
divided into
• Irreversible
• Reversible or “Masked”
 Rescued by antigen retrieval
The first attempt to “improve” the immunoreactivity
of formalin-fixed tissue antigens was by use of
tryptic digestion prior to immunofluorescent staining.
Proteolytic digestion compensates for the
impermeable nature of cross linked fixatives and
allowing hidden determinants to be exposed.
The concept of recovering lost immunoreactivity
Through exposure to heat near the boiling point of
water
But ,went against the tenet of protecting proteins from
the denaturing effect of heat.
The principle of antigen retrieval relies on the
application of heat for varying lengths of time to
formalin fixed paraffin embedded (FFPE) tissue
sections in an aqueous medium.
After deparaffinizing and rehydrating the tissue
sections, the slides are immersed in an aqueous
solution commonly referred to as a “retrieval
solution”.
The following techniques can retrieve many masked
antigens in routinely processed tissue:
 Proteolytic enzyme digestion
 Microwave antigen retrieval
 Microwave and trypsin antigen retrieval
 Pressure cooker antigen retrieval.
Pre- treating formalin-fixed routinely processed
paraffin sections with proteolytic enzymes to
unmask certain antigenic determinants was
described by Huange et al. (1976), Curran &
Gregory (1977). and Mepham et al. (1979).
The most popular enzymes-Trypsin
-Protease
 It is generally accepted that the digestion somehow breaks
down formalin cross linking.
 Hence the antigenic sites for number of antibodies are
uncovered.
 Pure trypsin has a very limited digestion effect on formalin
fixed paraffin section
 Essential for the demonstration of Cytokeratin & CD3.
Pitfalls of proteolytic digestion .
Under digestion results in very little staining.
Over digestion can result in very sever tissue
damage.
Batches of trypsin varies even from same source.
Pitfalls of proteolytic digestion .
Many antigens do not retrieved .
Some even destroyed by proteolytic enzyme.
The specificity of some primary antigens altered.
Allergy to trypsin
 Remains largely unknown
 Heat is obviously of great importance in reversing the
damages caused by the fixation with formalin and
embedding in paraffin.
 Some cross-links are reversible (Schiff bases), thus
restoring the immunochemical integrity of the protein,
while others are not (methylene bridges).
 Heat-induced AR has been more successful than the
use of proteolytic enzymes
 Microwave oven heating retrieves many antigens
though previously lost or destroyed by routine
histopathological method.
 Dewaxed section of tissue is boiled with the various
solutions like m-citrate buffer pH 6.
 The prerequisite for this technique is use of strong
adhesive such as Vectabond or amino
propyltriethoxysilane(APES).
Replacing microwave oven with pressure cooker.
Optimized microwave oven heating not produce
consistent result.
Comparatively this method is consistent & less time
consuming.
Also require the strong adhesive.
Reported by Sandison et al in 1994
Heat pretreatment increases the sensitivity of
sections to the subsequent proteolytic digestion.
Drastically reduces the trypsin time
Advantages
Dilution factor of primary antibodies are greatly
increase.
Labeling of other antigens
Disadvantages
Proteolytic enzymes can destroy the sections.
Staining distribution can be altered.
Enzyme labels
Colloidal metal labels
Fluorescent labels
Radiolabels
Enzymes are most widely used labels.
Chromogen using standard histochemical method
produce a stable colored reaction end product
suitable for light microscopy.
Horseradish peroxidase is most widely used
enzyme.
There are also several chromogens for demonstration
of peroxidase.
 Diaminobenzedine(DAB)tertrahydrochloride- brown
 3-amino-9-ethylcarbazole- red
 4chloro-l-naphthol-blue
 Hanker-Yates reagent-dark blue
 Alpha-naphthol pyronin –redish purple.
Colloidal gold is most common metal tracer in use.
Pink in color when observed in transmitted light.
Silver participation reaction can be used to amplify
the visibility of gold conjugate thereby allowing the
use of smaller, more stable gold conjugate.
Colloidal gold has much wider usage with the
electron microscope.
Tissue/cells
• Need a good positive and negative
Reagent
• When trying new technique
 Indicate that proper staining technique was achieved
 Use the same control over time
• Follow staining consistency over time
• Familiarity with pattern
Maintenances
Stain first and last longer
Monitor antigenicity over time
Internal control
• Built-in or intrinsic controls
• Target antigen within normal tissue elements in addition
to tissue elements being evaluated
• Can replace external positive control
Internal control examples:
• S-100 protein in both melanoma and normal tissue
• Desmin present in blood vessel musculature
Used to determine antibody specificity
Use tissue without antigen expression
May need to identify negative cells within tissue
 The ideal negative control is omission of primary
antibody.
 In absorption control the primary antibodies are used
but not in pure form.
 Pre-absorption of primary antibody with purified antigen.
 This type of control is used in characterization &
evaluation of new antibodies.
The bonding between the primary & secondary
antibody is prevented in indirect technique by use of
some control.
This type of control is know as blocking control.
Textbook of microbiology Anathnarayan.6th
edition
Theory & practices of histologycal
thecnique – bancroff 5th edition
Immunohistochemical Staining Methods
Fourth Edition – Dako.
Science of lab diagnosis by john croker .
2nd edition.
IHC

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IHC

  • 1. 1 Presented by Dr. Shrikant Sonune Guided by Dr Ashok Patil, Dr Shilpa Kandalgaonkar, Dr Mayur Chaudhary, Dr Suyog Tupsakhare, Dr Mahesh Gabhane. Immunohistochemical technique (part II)
  • 2.
  • 3. Historical aspect Fixation for IHC Antigen retrieval Labels Control
  • 4. • 1941: Coons et all. have demonsrated antigens on tissue sections by using an antibody which was linked to an florescent label. • 1966: Nakane and Pierce as well as Avrameas and Uriel reported the use of secondary antibody which was conjugated with peroxidase enzyme. • 1970 : Sternberger et al described the peroxidase- antiperoxidase technique. • 1971: Envall & Perlman reported the use of alkaline phosphatase labeling
  • 5. • 1975: Kohler & Milstein described a revolutionary method for production of monoclonal antibodies • 1976 : Huang et al described the use of trypsin digestion on paraffin sections as a means of reveling some antigens otherwise masked by formalin fixation & paraffin processing. • 1977:Heggness & Ash proposed the use of avidin – biotin for immunofluorescence.
  • 6. • 1979: Sternberger described the peroxidase-antiperoxidase method. • 1981: Hsu et all. have defined the method of avidin-biotin- peroxidase complex which is abbreviated as ABC method. • 1984 : Alkaline phosphatase anti alkaline phosphatase technique using a red reaction product. • 1993: Advent of one step system, based on a two layer dextran polymer. Reported by Pluzek et al at UK pathological society meeting.
  • 7. 1994 : Norton reported that the stainless steel pressure cooker was more efficient than the microwave oven for retrieving some antigens & this was conformed by Miller et al. 1998: Dako launched a new labeling system based on the dextran polymer technology.
  • 8. • Intercellular antigens, • Cell surface antigens, • Tissue antigen for diagnosing autoimmune diseases • Protein hormones in histopathological diagnosis • Soluble antigens of the cell • Diagnosis of the endocrine tumors • Small amounts of peptides in endocrine or neuroendocrine cells • Immunodeposits • Tumoral markers • Tumor typing
  • 9. 1. Fixation Fresh unfixed, fixed, or formalin fixation and paraffin embedding 2. Sectioning Tissue preparation
  • 10. 1. Antigen retrieval Proteolytic enzyme method and Heat-induced method 2. Inhibition of endogenous tissue components 3% H2O2 Pretreatment
  • 11. Make a selection based on the type of specimen, the primary antibody, the degree of sensitivity and the processing time required. Staining
  • 12. The requirements of a fixative vary according to the different techniques employed
  • 13.  Blood smears are preserved by air-drying.  The subsequent fixation method used depends upon the staining technique.  Routine air-drying for 1–2 hours does not have a deleterious effect on most antigens studied immunocytochemically.  Routine air-drying for 1–2 hours does not have a deleterious effect on most antigens studied immunocytochemically.
  • 14. Most cytology smears are immediately fixed in 95% ethanol or are spray-fixed with a carbowax containing alcoholic fluid. Ethanol fixation prevents staining for most leukocyte markers, such as T and B cell antigens.
  • 15. Two preparations can be made,  one wet-fixed  one air-dried. With wet-fixed smears, one of the main problems is the loss of cells, particularly clumps, during the Immunostaning incubations.
  • 16. Cryostat sections give much better antigen preservation than paraffin sections. Additionally, fixative can be used with cryostat sections, Different and optimal fixative for each antigen,
  • 17.
  • 18. The most popular fixatives contain  Formalin (40% w/v formaldehyde in water),  A neutral salt to maintain tonicity  A buffering system to maintain pH. Well tolerated by tissues Have good penetration. Generally formalin-based fixatives are excellent for most Immunostaning procedure.
  • 19.  Formaldehyde fixes tissue by reacting primarily with basic amino acids to form cross-linking “methylene bridges.”  Relatively low permeability to macromolecules and that the structures of intracytoplasmic proteins are not significantly altered.  The great variation in time and conditions for fixation that cause majority of problems in immunochemistry.
  • 20. Many antigens can be demonstrated after the use of appropriate pretreatment methods, Such as proteolytic enzyme digestion and/or antigen retrieval, particularly if polyclonal antisera are used.
  • 21. If monoclonal antibodies are to be utilized on formalin-fixed, paraffin-embedded tissue sections, then  Does formaldehyde react with the epitope under investigation?  Does it react with adjacent amino acids causing conformational changes?  Does paraffin processing destroy the epitope under investigation?
  • 22. If there are conformational changes resulting from the reaction of formaldehyde with amino acids adjacent to the epitope, These can often be reversed using proteolytic enzyme digestion or antigen retrieval.
  • 23. If there are conformational changes in the epitope due to tissue processing, these are irreversible. Many epitopes are sensitive to heat, and during the paraffin-embedding step, tissues are heated to the melting point of wax, usually between 50–60°C.
  • 24.  Saturated (1.2% w/v) aqueous picric acid 75 mL  Formalin (40% w/v formaldehyde) 25 mL  Glacial acetic acid 5 mL  A saturated solution (w/v) contains 1.17 g/100 mL distilled water.
  • 25. This fixative penetrates rapidly and fixes all tissues very well,  Fixation time is 1–12 hours  Lipid-containing antigens may be affected.  Tissues fixed in Bouin’s solution must be washed in 70% ethanol to precipitate soluble picrates prior to aqueous washes.  After cutting sections, the yellow color in the tissue can be removed by treatment with 5% (w/v) sodium thiosulfate, followed by a water wash.
  • 26. To improve cytological preservation and minimize distortion associated with formaldehyde-based fixatives, mercuric chloride-based fixatives are used. These fluids are generally poor penetrators and are not well tolerated by the tissues.
  • 27. Frequently, mercuric chloride-based fixatives are used secondarily to formalin. Tissues are initially fixed in formal saline or neutral buffered formalin. Tissues are then immersed in the mercuric chloride- containing fluid for a further period of fixation.
  • 28. Mercuric chloride-containing fixatives are additive and coagulative. Suitable for the demonstration of intracytoplasmic antigens.
  • 29. The permeability of the tissue is greater Coagulant fixatives, Antibody penetration is better, Resulting in a more intense Immunostaning. These fixatives are also having additive effect.
  • 30.  B5 is widely advocated for the fixation of lymph node Biopsies B5 STOCK SOLUTION  Mercuric chloride 2 g  Sodium acetate 2.5 g  Distilled water 200 mL B5 WORKING SOLUTION  B5 Stock solution 20 mL  Formalin (40% w/v formaldehyde) 2 mL
  • 31. ZENKER’S STOCK SOLUTION  Mercuric chloride 50 g  Potassium dichromate 25 g  Sodium sulfate 10 g  Distilled water to 1 liter ZENKER’S WORKING SOLUTION  Zenker’s stock solution 100 mL  Glacial acetic acid 5 mL CLEARING SOLUTION A  Iodine 0.5 g  70% ethanol 100 mL CLEARING SOLUTION B  Sodium thiosulfate 5% (w/v) in distilled water
  • 32. Morphological detail is generally well preserved, Penetration is poor Fixation time is 2–15 hours at room temperature, Sections are washed in running water for at least 1 hour to remove potassium dichromate deposits.
  • 33.  The tissue is then dehydrated using clearing agent A, helps to remove mercuric deposits prior to sectioning.  After cutting sections and collecting on clean glass slides,  The tissue again incubated in clearing solution A for 1–2 minutes.  Sections are rinsed in water, and placed in clearing solution for 1–2 minutes.
  • 34. This fixative is becoming increasingly popular, partly because it preserves membrane proteins. Zinc chloride 500 g Formalin (40% w/v formaldehyde) 3 L Glacial acetic acid 19 mL Distilled water 20 L
  • 35. WORKING SOLUTION  3% (w/v) Paraformaldehyde 50 mL M  Disodium hydrogen orthophosphate 100 mL  Lysine 0.9 g  Sodium periodate 0.15 g  Adjust to pH 7.4.
  • 36. First described by McLean and Nakane Preserve the micro anatomical relationship of cells and cytological details. Since the periodate oxidizes sugars to produce aldehydes which are cross linked with lysine. The paraformaldehyde stabilizes proteins.
  • 37. A recent modification to this solution involves the addition of potassium dichromate (PLDP). This chemical is added to preserve lipids and the fixative should therefore preserve all protein, carbohydrate and lipid antigenic determinants.
  • 38. It must be noted, however, that since additive compounds are formed, immunoreactivity may be blocked. Furthermore, cytological detail is not as good as with other fluids.
  • 39. Sainte-Marie first described the use of alcohol fixation and paraffin processing for immunocytochemistry. Small pieces of tissue are fixed rapidly and show good cytological preservation.
  • 40. They are in some ways ideal fixatives for immunocytochemistry. Since alcohols are coagulant fluids and do not form additive compounds, They permit good antibody penetration and do not block immunoreactive determinants.
  • 41. Conformational changes can occur. Alcohols precipitate carbohydrates Hence, useful for surface membrane antigens, which often display carbohydrate-containing epitopes.
  • 42. Applied to frozen sections or smears. Proteolytic digestion or antigen retrieval is of no use following alcohol fixation Ethanol fixation results in destruction of the tissue section or smear.
  • 43.  Acetone is an excellent preservative of immunoreactive sites, leaving most sites intact.  But it is a very poor penetrator.  It is used only for smears and cryostat sections.  Fixation is not complete, and extended incubation in buffers may result in chromatolysis and loss of membranes.
  • 44. The dilemma of trying to obtain good morphological preservation while maintaining immunoreactivity is even more apparent in ultra structural immunochemical studies. For routine electron microscopy, it is usual to employ glutaraldehyde primary fixation followed by post fixation in osmium tetra oxide.
  • 45. This combination produces excellent ultra structural detail with good preservation of membranes. With immunochemistry, however, the combination of glutaraldehyde and osmium tetra oxide is not generally useful.
  • 46. Pre treatment of ultrathin sections with hydrogen peroxide or sodium metaperiodate to counteract the deleterious effects of osmium. The glutaraldehyde primary fixation is not suitable for many antigens, at least when employing the concentrations of glutaraldehyde used for routine electron microscopy.
  • 47. WORKING SOLUTION 0.2 M Phosphate buffer, pH 7.4 50 mL 8% (w/v) Paraformaldehyde 25 mL 25% (w/v) Glutaraldehyde 0.8 mL Distilled water 24.2 mL
  • 48. If the tissue is frozen The sections may need to be used in immunohistochemistry Acetone fixed: - precipitates proteins onto cell surface---may extract lipids - is needed for many of the “CD” antibodies Unfixed: Advantage: antigens are unaltered Disadvantage: sections may fall off slide during staining Paraformaldehyde fixed: - needs to be freshly made, or frozen soon after
  • 49. - Deparaffinize ( remove the infiltrated paraffin wax, by using organic solvents) - The section then needs to be rehydrated, by sequential immersion in graded alcohols (100%, 70% , 50% and then PBS) - The deparaffinized section may need to be treated to expose buried antigenic epitopes with either proteases or by heating in low pH citrate buffer , or high pH EDTA buffer (Antigen Retrieval) If the tissue is paraffin embedded
  • 50. The loss of immunoreactivity by many antigens caused as a result of fixation in formalin. Hence many challenges for doing IHC in such cases
  • 51.  Epitopes 2 types  Formalin resistant- even after routine formalin fixation this type of epitopes remains unchanged  Formalin sensitive- after routine formalin fixation this type of epitopes shows substantial changes. It can be divided into • Irreversible • Reversible or “Masked”  Rescued by antigen retrieval
  • 52. The first attempt to “improve” the immunoreactivity of formalin-fixed tissue antigens was by use of tryptic digestion prior to immunofluorescent staining. Proteolytic digestion compensates for the impermeable nature of cross linked fixatives and allowing hidden determinants to be exposed.
  • 53. The concept of recovering lost immunoreactivity Through exposure to heat near the boiling point of water But ,went against the tenet of protecting proteins from the denaturing effect of heat.
  • 54. The principle of antigen retrieval relies on the application of heat for varying lengths of time to formalin fixed paraffin embedded (FFPE) tissue sections in an aqueous medium. After deparaffinizing and rehydrating the tissue sections, the slides are immersed in an aqueous solution commonly referred to as a “retrieval solution”.
  • 55. The following techniques can retrieve many masked antigens in routinely processed tissue:  Proteolytic enzyme digestion  Microwave antigen retrieval  Microwave and trypsin antigen retrieval  Pressure cooker antigen retrieval.
  • 56. Pre- treating formalin-fixed routinely processed paraffin sections with proteolytic enzymes to unmask certain antigenic determinants was described by Huange et al. (1976), Curran & Gregory (1977). and Mepham et al. (1979). The most popular enzymes-Trypsin -Protease
  • 57.  It is generally accepted that the digestion somehow breaks down formalin cross linking.  Hence the antigenic sites for number of antibodies are uncovered.  Pure trypsin has a very limited digestion effect on formalin fixed paraffin section  Essential for the demonstration of Cytokeratin & CD3.
  • 58. Pitfalls of proteolytic digestion . Under digestion results in very little staining. Over digestion can result in very sever tissue damage. Batches of trypsin varies even from same source.
  • 59. Pitfalls of proteolytic digestion . Many antigens do not retrieved . Some even destroyed by proteolytic enzyme. The specificity of some primary antigens altered. Allergy to trypsin
  • 60.  Remains largely unknown  Heat is obviously of great importance in reversing the damages caused by the fixation with formalin and embedding in paraffin.  Some cross-links are reversible (Schiff bases), thus restoring the immunochemical integrity of the protein, while others are not (methylene bridges).  Heat-induced AR has been more successful than the use of proteolytic enzymes
  • 61.  Microwave oven heating retrieves many antigens though previously lost or destroyed by routine histopathological method.  Dewaxed section of tissue is boiled with the various solutions like m-citrate buffer pH 6.  The prerequisite for this technique is use of strong adhesive such as Vectabond or amino propyltriethoxysilane(APES).
  • 62. Replacing microwave oven with pressure cooker. Optimized microwave oven heating not produce consistent result. Comparatively this method is consistent & less time consuming. Also require the strong adhesive.
  • 63. Reported by Sandison et al in 1994 Heat pretreatment increases the sensitivity of sections to the subsequent proteolytic digestion. Drastically reduces the trypsin time
  • 64. Advantages Dilution factor of primary antibodies are greatly increase. Labeling of other antigens Disadvantages Proteolytic enzymes can destroy the sections. Staining distribution can be altered.
  • 65. Enzyme labels Colloidal metal labels Fluorescent labels Radiolabels
  • 66. Enzymes are most widely used labels. Chromogen using standard histochemical method produce a stable colored reaction end product suitable for light microscopy. Horseradish peroxidase is most widely used enzyme.
  • 67. There are also several chromogens for demonstration of peroxidase.  Diaminobenzedine(DAB)tertrahydrochloride- brown  3-amino-9-ethylcarbazole- red  4chloro-l-naphthol-blue  Hanker-Yates reagent-dark blue  Alpha-naphthol pyronin –redish purple.
  • 68. Colloidal gold is most common metal tracer in use. Pink in color when observed in transmitted light. Silver participation reaction can be used to amplify the visibility of gold conjugate thereby allowing the use of smaller, more stable gold conjugate. Colloidal gold has much wider usage with the electron microscope.
  • 69.
  • 70. Tissue/cells • Need a good positive and negative Reagent • When trying new technique
  • 71.  Indicate that proper staining technique was achieved  Use the same control over time • Follow staining consistency over time • Familiarity with pattern
  • 72. Maintenances Stain first and last longer Monitor antigenicity over time
  • 73. Internal control • Built-in or intrinsic controls • Target antigen within normal tissue elements in addition to tissue elements being evaluated • Can replace external positive control
  • 74. Internal control examples: • S-100 protein in both melanoma and normal tissue • Desmin present in blood vessel musculature
  • 75. Used to determine antibody specificity Use tissue without antigen expression May need to identify negative cells within tissue
  • 76.  The ideal negative control is omission of primary antibody.  In absorption control the primary antibodies are used but not in pure form.  Pre-absorption of primary antibody with purified antigen.  This type of control is used in characterization & evaluation of new antibodies.
  • 77. The bonding between the primary & secondary antibody is prevented in indirect technique by use of some control. This type of control is know as blocking control.
  • 78. Textbook of microbiology Anathnarayan.6th edition Theory & practices of histologycal thecnique – bancroff 5th edition Immunohistochemical Staining Methods Fourth Edition – Dako. Science of lab diagnosis by john croker . 2nd edition.