Collaborative Open Source Tools for Open Science

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Transforming research communication through the use of community-driven open source tools that will improve the published record and reproducibility

Technology

Kristen Ratan
Collaborative Knowledge Foundation
April 21, 2016
Allen Press Emerging Trends in Scholarly Publishing 2016
Collaboration:
Creating a New Mindset
@cokofoundation @kristenratanwww.coko.foundation

CKF: Building open source
tools to improve knowledge
production & research output
coko.foundation

“everybody in the group
is thinking creatively and
sharing openly”
John Abele
Author of The Collaboration Paradox

Collaboration on
three levels
1.  Collaborative knowledge production
2.  Collaborative product design
3.  Collaboration among publishers

Authoring and
peer review today
Shuffling frustrating formats around
Email

Collaborative Webspace
Real-time, concurrent discussion and work
In and around a web-based research object

Networked Output
Shared output is linked set of files tied together
with content or narrative

Result is increased integrity,
transparency
and speed

Building collaboratively with partners, stakeholders
and users from inception through delivery
Collaborative Product Design

Critical ingredients
1.  Diversity (team)
2.  Facilitation (method)
3.  Product flexibility (goal)

Diversity
Moving away from
technocratic meritocracy
and towards a community
of diverse stakeholders

Facilitation
leaders need
to cede control –
not vigorously
exert it

Products that can be
re-invented by users breed
innovation
Flexibility

Create the
public utilities
of publishing

@cocofoundationwww.coko.foundation
CKF Technology Suite
Authoring Workflow
Production
Dashboards
Data Tools
Ingest &
conversion
Web Delivery
Web Editor
Collections / TOC
Manager
Enrichment
Collaboration &
annotation
Syndication
INK Backend and
Admin
PubSweet Backend and Admin

@cocofoundationwww.coko.foundation
Collaboration
& annotation
Dashboards
Workflow
Ingest &
conversion
TOC Manager
Web Editor
Production
Enrichment
INK Backend and
Admin
PubSweet Backend and Admin
Community-built
enrichments
eBooks Platform

@cocofoundationwww.coko.foundation
Authoring Workflow
Production
Dashboards
Data Tools
Ingest &
conversion
Web Delivery
Web Editor
Collections / TOC
Manager
Enrichment
Collaborative
Editing / Peer
Review
Syndication
INK Backend and
Admin
PubSweet Backend and Admin
Journals Platform

@cocofoundationwww.coko.foundation
Ingest &
conversion
Enrichment
INK Backend and
Admin
PubSweet Backend and Admin
Community-built
enrichments
Workflow Dashboards
Web Editor Production
Aggregator Production
Environment

@cocofoundationwww.coko.foundation
CKF Technology Suite – Our shared roads
Authoring Workflow
Production
Dashboards
Data Tools
Ingest &
conversion
Web Delivery
Web Editor
Collections / TOC
Manager
Enrichment
Collaboration &
annotation
Syndication
INK Backend and
Admin
PubSweet Backend and Admin
Community-built
converters or
enrichments
Community-built components

Shared Infrastructure
•  Built and maintained as an open source project
•  Lower foundational costs, enabling investment in
innovation
•  Community-led

Collaboration:
Creating a New Mindset
Kristen Ratan
Collaborative Knowledge Foundation
@cokofoundation @kristenratanwww.coko.foundation

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Access to books in higher education is an issue to be addressed, especially in the context of un- derdeveloped countries, such as those in Latin America. More than just financial issues, cultural aspects and need for adaptation must be considered. The present conceptual paper proposes a methodology framework that would support collaborative open textbook initiatives. This methodology intends to be the main guideline for a digital ecosystem for the collaborative production of open textbooks and has the potential to solve standing methodological problems of current initiatives, such as Wikibooks and Connexions. The system's architecture and construction will be guided by six collaborative writing dimensions: process, roles, timing, con- trolling, granularity, and writing groups. Each dimension will coordinate an as- pect of the collaborative work and is detailed in the methodology proposed in this paper. This paper is divided in the following parts: the first part introduces the sub- ject, being followed by an analysis of related works about collaboration and Computer-Supported Cooperative Work; in this section, some authors, ideas, and methodological aspects of collaborative writing are also discussed. Next, the paper shows the proposal of a Digital Ecosystem for the collaborative creation of open textbooks, the six dimensions of this Ecosystem, and its respective descriptions. The work finishes with some conclusions about the proposal and the next steps needed to implement it in the real world. Authors: Ismar Frango Silveira, Xavier Ochôa, Alex Cuadros-Vargas, Alén Pérez Casas, Ana Casali, Andre Ortega, Antonio Silva Sprock, Carlos Henrique Alves, Cesar Alberto Collazos Ordoñez1, Claudia Deco, Ernesto Cuadros-Vargas, Everton Knihs, Gonzalo Parra, Jaime Muñoz-Arteaga, Jéssica Gomes dos Santos, Julien Broisin, Nizam Omar, Regina Motz, Virginia Rodés, and Yosly Hernández C. Bieliukas

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Collaborative Open Source Tools for Open Science

1. Kristen Ratan Collaborative Knowledge Foundation April 21, 2016 Allen Press Emerging Trends in Scholarly Publishing 2016 Collaboration: Creating a New Mindset @cokofoundation @kristenratanwww.coko.foundation

2. CKF: Building open source tools to improve knowledge production & research output coko.foundation

3. “everybody in the group is thinking creatively and sharing openly” John Abele Author of The Collaboration Paradox

4. Collaboration on three levels 1.  Collaborative knowledge production 2.  Collaborative product design 3.  Collaboration among publishers

5. Collaboration in Knowledge Production

6. Authoring and peer review today Shuffling frustrating formats around Email

7. Collaborative Webspace Real-time, concurrent discussion and work In and around a web-based research object

8. Networked Output Shared output is linked set of files tied together with content or narrative

9. Result is increased integrity, transparency and speed

10. Collaborative Product Design

11. Building collaboratively with partners, stakeholders and users from inception through delivery Collaborative Product Design

12. Critical ingredients 1.  Diversity (team) 2.  Facilitation (method) 3.  Product flexibility (goal)

13. Diversity Moving away from technocratic meritocracy and towards a community of diverse stakeholders

14. Facilitation leaders need to cede control – not vigorously exert it

15. Products that can be re-invented by users breed innovation Flexibility

16. COLLABORATION ACROSS PUBLISHERS

17. Create the public utilities of publishing

18. @cocofoundationwww.coko.foundation CKF Technology Suite Authoring Workflow Production Dashboards Data Tools Ingest & conversion Web Delivery Web Editor Collections / TOC Manager Enrichment Collaboration & annotation Syndication INK Backend and Admin PubSweet Backend and Admin

19. @cocofoundationwww.coko.foundation Collaboration & annotation Dashboards Workflow Ingest & conversion TOC Manager Web Editor Production Enrichment INK Backend and Admin PubSweet Backend and Admin Community-built enrichments eBooks Platform

20. @cocofoundationwww.coko.foundation Authoring Workflow Production Dashboards Data Tools Ingest & conversion Web Delivery Web Editor Collections / TOC Manager Enrichment Collaborative Editing / Peer Review Syndication INK Backend and Admin PubSweet Backend and Admin Journals Platform

21. @cocofoundationwww.coko.foundation Ingest & conversion Enrichment INK Backend and Admin PubSweet Backend and Admin Community-built enrichments Workflow Dashboards Web Editor Production Aggregator Production Environment

22. @cocofoundationwww.coko.foundation CKF Technology Suite – Our shared roads Authoring Workflow Production Dashboards Data Tools Ingest & conversion Web Delivery Web Editor Collections / TOC Manager Enrichment Collaboration & annotation Syndication INK Backend and Admin PubSweet Backend and Admin Community-built converters or enrichments Community-built components

23. Shared Infrastructure •  Built and maintained as an open source project •  Lower foundational costs, enabling investment in innovation •  Community-led

24. Collaboration: Creating a New Mindset Kristen Ratan Collaborative Knowledge Foundation @cokofoundation @kristenratanwww.coko.foundation

Collaborative Open Source Tools for Open Science

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