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@jandot
     Jan Aerts , Leuven, Belgium

Just used @yokofakun and Redon's
OWW to check again what CTR
stands for.


Wed Jun 09 08:49:58 +0000 2010
@hongiiv
     Hong ChangBum(###) , iphone:37.607698,126.930391

@yokofakun Your lab notebook is
very useful for me. I'm finding variation
using Roche454, GATK from Korean
population. thank u : )

Fri Jul 16 12:23:46 +0000 2010
@soilandreyes
     Stian Soiland-Reyes , Manchester, UK

@yokofakun I'm sorry.. nobody should
use #Axis anymore, it's way too buggy.
Tried Apache #CXF?


Tue Jan 04 14:13:07 +0000 2011
@brent_p
     brent pedersen , berkeley, ca

nice use of many public
#bioinformatics resources to annotate
variants: http://bit.ly/evYpPe by
@yokofakun

Tue Jan 04 18:56:02 +0000 2011
@kshameer
     Khader Shameer , Rochester, MN

RT @brent_p: nice use of many
public #bioinformatics resources to
annotate variants: http://bit.ly/evYpPe
by @yokofakun #bioinformatics

Wed Jan 05 03:24:19 +0000 2011
@greystate
     Chriztian Steinmeier , Brabrand, Denmark

@yokofakun Hi - do you know about
the namespace-alias instruction?
Here's a version using that: http://
pastie.org/1142402 /cheers

Mon Sep 06 21:45:12 +0000 2010
@kshameer
     Khader Shameer , Rochester, MN

Glad to hear +ve feedback from one
person in a group that offered me a
job was following me, my tweets and
feeds from BioStar QA #ftw

Wed Sep 15 20:43:06 +0000 2010
@delagoya
     Angel Pizarro , Philly

Going to be posting a programmer
position in bioinformatics soon. DM me
if you're interested.


Thu Sep 16 18:51:39 +0000 2010
@caddymob
     Jason Corneveaux , Phoenix, AZ

@yokofakun try Seattle SNP... more
up-to-date than SIFT



Mon Oct 11 14:28:03 +0000 2010
@hongiiv
     Hong ChangBum(###) , iphone:37.607698,126.930391

@yokofakun Novel/NonSyn SNP is
make me tired (-.-'), annovar supports
dbSNP/SIFT annotation.


Tue Oct 12 15:53:55 +0000 2010
@phidias51
     Mark Fortner , San Diego

@yokofakun try using
tablelayout.dev.java.net or use one of
the free GUI editors like Matisse for
Netbeans or Instantiations for eclipse

Sat Oct 16 15:42:59 +0000 2010
@apfejes
     Anthony Fejes , Vancouver

Is there such a thing as a complete list
of human growth factor genes, and if
so, why doesn't google know about it?


Wed Oct 27 18:13:55 +0000 2010
@yokofakun
     Pierre Lindenbaum , Nantes, France

@apfejes search with GO/GOA ?
http://amigo.geneontology.org/
cgi-bin/amigo/term-details.cgi?
term=GO:0008083

Wed Oct 27 18:16:51 +0000 2010
@apfejes
     Anthony Fejes , Vancouver

@yokofakun Great Advice! I was just
struggling my way through GO listings
- thanks!


Wed Oct 27 18:25:35 +0000 2010

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Bioinfo tweets

  • 1.
  • 3.
  • 4. ! #∃∃% ∃ ∃
  • 5. ∃ ∃ ∃ ! ∃ ∃ ( # #∃∃ % %∃ )
  • 6. ∗ #∃∃ ∃∃ ∃ ∃+,)− ∗ .
  • 8. 0
  • 9. 1 ! %
  • 10. 2(345
  • 11. 657)859 0
  • 14. @jandot Jan Aerts , Leuven, Belgium Just used @yokofakun and Redon's OWW to check again what CTR stands for. Wed Jun 09 08:49:58 +0000 2010
  • 15. @hongiiv Hong ChangBum(###) , iphone:37.607698,126.930391 @yokofakun Your lab notebook is very useful for me. I'm finding variation using Roche454, GATK from Korean population. thank u : ) Fri Jul 16 12:23:46 +0000 2010
  • 16. @soilandreyes Stian Soiland-Reyes , Manchester, UK @yokofakun I'm sorry.. nobody should use #Axis anymore, it's way too buggy. Tried Apache #CXF? Tue Jan 04 14:13:07 +0000 2011
  • 17. @brent_p brent pedersen , berkeley, ca nice use of many public #bioinformatics resources to annotate variants: http://bit.ly/evYpPe by @yokofakun Tue Jan 04 18:56:02 +0000 2011
  • 18. @kshameer Khader Shameer , Rochester, MN RT @brent_p: nice use of many public #bioinformatics resources to annotate variants: http://bit.ly/evYpPe by @yokofakun #bioinformatics Wed Jan 05 03:24:19 +0000 2011
  • 19. @greystate Chriztian Steinmeier , Brabrand, Denmark @yokofakun Hi - do you know about the namespace-alias instruction? Here's a version using that: http:// pastie.org/1142402 /cheers Mon Sep 06 21:45:12 +0000 2010
  • 20. @kshameer Khader Shameer , Rochester, MN Glad to hear +ve feedback from one person in a group that offered me a job was following me, my tweets and feeds from BioStar QA #ftw Wed Sep 15 20:43:06 +0000 2010
  • 21. @delagoya Angel Pizarro , Philly Going to be posting a programmer position in bioinformatics soon. DM me if you're interested. Thu Sep 16 18:51:39 +0000 2010
  • 22. @caddymob Jason Corneveaux , Phoenix, AZ @yokofakun try Seattle SNP... more up-to-date than SIFT Mon Oct 11 14:28:03 +0000 2010
  • 23. @hongiiv Hong ChangBum(###) , iphone:37.607698,126.930391 @yokofakun Novel/NonSyn SNP is make me tired (-.-'), annovar supports dbSNP/SIFT annotation. Tue Oct 12 15:53:55 +0000 2010
  • 24. @phidias51 Mark Fortner , San Diego @yokofakun try using tablelayout.dev.java.net or use one of the free GUI editors like Matisse for Netbeans or Instantiations for eclipse Sat Oct 16 15:42:59 +0000 2010
  • 25. @apfejes Anthony Fejes , Vancouver Is there such a thing as a complete list of human growth factor genes, and if so, why doesn't google know about it? Wed Oct 27 18:13:55 +0000 2010
  • 26. @yokofakun Pierre Lindenbaum , Nantes, France @apfejes search with GO/GOA ? http://amigo.geneontology.org/ cgi-bin/amigo/term-details.cgi? term=GO:0008083 Wed Oct 27 18:16:51 +0000 2010
  • 27. @apfejes Anthony Fejes , Vancouver @yokofakun Great Advice! I was just struggling my way through GO listings - thanks! Wed Oct 27 18:25:35 +0000 2010
  • 28. @attilacsordas attilacsordas , iPhone: 37.398337,-122.070322 @yokofakun hey, jrunscript sounds interesting! 1st time I hear about it Fri Nov 12 12:15:05 +0000 2010
  • 29. @mza Matt Wood , Cambridge, UK 2 terabases a week coming off the sequencers at Sanger #AGBT http:// t.co/eeXXX4R (via @new299) Wed Feb 02 19:20:17 +0000 2011
  • 30. @jandot Jan Aerts , Leuven, Belgium Working on the NGS and analysis course I'll be giving. @yokofakun's slides at http://t.co/pkCE9jG give some good ideas for pictures Sun Feb 06 08:58:08 +0000 2011
  • 31. @kshameer Khader Shameer , Rochester, MN Reverse engineering @yokofakun's solutions at BioStar to get quick statistics about SNPs via UCSC mysql API #muchbetterthanrawdatamunging Fri Feb 11 22:28:53 +0000 2011
  • 32. @caddymob Jason Corneveaux , Phoenix, AZ Super! Twitter works. Thx to @yokofakun for sending me the dbSNP rs merge list: http://bit.ly/ ffJAXH Wed Feb 16 18:27:03 +0000 2011
  • 33. @EdgeBio Edge Bio , Washington DC Metro We're hiring a Bioinformatics Engineer. Do you have NGS experience? http://ow.ly/44YgB #bioinformatics #genomics #jobs Mon Feb 28 18:58:30 +0000 2011
  • 34. @dgmacarthur Daniel MacArthur , Cambridge, UK Handy overview of next-gen sequencing by @GoldenHelixInc: http://j.mp/aLRJVo Looking forward to the rest of the series... Mon Nov 15 19:15:05 +0000 2010
  • 35. @larry_parnell Larry Parnell , Boston, MA USA Of 1.6 million conserved non- coding seqs in mouse, 52% map to their predicted enhancers, 12% to promoters #RECOMB Fri Nov 19 20:06:45 +0000 2010
  • 36. @kshameer Khader Shameer , Rochester, MN Share you inputs for designing a next generation sequence informatics course: http://bit.ly/c4vS97 #ngs #bioinformatics #genomics Fri Nov 05 15:59:32 +0000 2010
  • 37. @yokofakun Pierre Lindenbaum , Nantes, France 278.766.958 genotypes (marker,individual, allele1, allele2) what would be the best way to store this stuff ? Fri Mar 28 16:17:05 +0000 2008
  • 38. @mndoci Deepak Singh , Between a molecule and a byte @yokofakun ... We use HDF5 to store genotypic information in the data management software we sell for GWAS Fri Mar 28 16:29:10 +0000 2008