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Control of Micro organisms‐
Sahaya Asirvatham
Prevent contamination
Prevent transmission of pathogen
To prevent decomposition & spoilage of product
To  prevent  contamination  in  aseptic  areas,  processes  like 
production of pharmaceuticals by fermentation.
To  maintain  aseptic  condition  in  operation  theaters,  filling 
area of non sterile pharmaceuticals.
Reasons for Controling Microorganisms
Sterilization
 
Sterilization is defined as the process by which an article, surface or the 
medium is freed of all living microorganism either in vegetative or spore 
state.
Essential stage in processing of any product used for parenteral 
administration, broken skin, mucosal surface or internal organ.
Fundamentals of Microbial Control
Important terms: 
Thermal death point (TDP)
 It is the lowest temperature at which all of the microorganism present
 in the liquid suspension will be killed in just 10 minutes.
Thermal death time (TDT)
 It is the minimum length of time whereby all microorganism present in
 the liquid culture medium will be killed at given temperature.
  
Fundamentals of Microbial Control
Disinfection: A treatment that reduces the total number of microbes on an 
object or surface, but does not necessarily remove or kill all of the microbes
Sanitation:  Reduction  of  the  microbial  population  to  levels 
considered safe by public health standards
Antiseptic:  A  mild  disinfectant  agent  suitable  for  use  on  skin 
surfaces
–cide:  to kill Bactericide:  chemical that destroys bacteria 
Fungicide:  a chemical that can kill fungal spores, hyphae, and yeasts
Virucide: a chemical that inactivates viruses
Sporicide:  can destroy bacterial endospores
Germicide and microbicide:  chemical agents that kill microorganisms
Stasis and static: to stand still
Bacteristatic: prevent the growth of bacteria
Fungistatic:  inhibit fungal growth
       Bactericidal Vs Bacteristatic  
Death (in terms of microorganisms) 
Irreversible loss of ability to reproduce.
Determined by inoculating culture to the medium
Pattern of Death in a Microbial Population
Bacterial  populations  die  at  a  constant 
logarithmic rate
Microorganisms were previously considered to be 
dead  when  they  did  not  reproduce  in  conditions 
that normally supported their reproduction
However  organisms  can  be  in  a  viable  but 
nonculturable (VBNC) condition  
Once they recover they may regain the ability to 
reproduce and cause infection  Pattern of Microbial death-an exponential
plot of survivors against mins of exposure to heating at 121 0
C.
Conditions affecting Antimicrobial Activity
1. Type of agent: 
    Physical or chemical
2. Nature of heat
3. Concentration, Dose, Time & temperature  of the agent
4. Bioburdon
5. Mechnism of Action of the agent  
6.Environment:
Physical & chemical properties of the medium or substance carrying the organism
Effectiveness of heat in acid is greater than in alkali
Consistency of the material (viscous: less penetration)
Concentration of carbohydrates increases thermal resistance
Presence of extraneous organic matter (inactivation of agent or protective effect)
Action of chemical agent Increases with increase in temperature. 
7. Kind of Microorganism: 
Microbial spp. Differe in susceptibility to physical & chemical agents
Vegetative cell of spore forming bacteria are more susceptible than spores
Spores are most resistant
8. Physiological State of Cells:
Young actively metabolizing cells are more susceptible 
In dormant cells the agent which causes damage through the interference with 
metabolism, non growing cell would not be affected
        
How Antimicrobial Agents Work: Their 
Modes of Action??
1. Damage to the cell wall or inhibition of cell­wall 
synthesis
2. Alteration of permeability of cytoplasmic membrane
3. Alteration of physical /chemical state of proteins & 
nucleic acid
4. Inhibition of proteins & nucleic acid synthesis
Survivor Curve
When exposed to a killing process, populations of microorganisms
generally  lose  their  viability  in  an  exponential  fashion, 
independent of the initial number of organisms.
Of the typical curves obtained, all have a linear portion which may 
be continuous  (plot A),  or may be  modified by an  initial shoulder 
(B) or by a reduced rate of kill at low survivor levels (C).
Short  activation  phase,  representing  an  initial  increase  in  viable 
count, may be seen during the heat treatment of certain bacterial 
spores.
Survivor curves have been employed principally in the examination 
of heat sterilization methods, but can equally well be applied to any
biocidal process.
Fig. 20.1 Typical survivor curves for bacterial spores
exposed to moist heat or gamma­radiation.
Expressions of resistance
D­value: 

The  resistance  of  an  organism  to  a  sterilizing 
agent can be described by means of the D­value. 
  

For heat and radiation treatments, respectively, 
this  is  defined  as  the  time  taken  at  a  fixed 
temperature  or  the  radiation  dose  required  to 
achieve a 90% reduction in viable cells (i.e. a 1 
log cycle reduction in survivors). 

The calculation of the D­value assumes a linear 
type A survivor curve, and must be corrected to 
allow for any deviation from linearity  with type 
B or C curves.
Expressions of Resistance
In  order  to  assess  the  influence  of  temperature  changes  on 
thermal resistance a relationship between temperature and log D­
value can be developed leading to the
expression of a z­value.
which represents the increase in temperature needed to
reduce the D­value of an organism by 90% (i.e. 1 log cycle
reduction). 
For  bacterial  spores  used  as  biological  indicators  for  moist  heat 
(B. Stearothermophilus) and dry heat (B. subtilis) sterilization
processes,  mean  z­values  are  given  as  10°C  and  22°C, 
respectively. 
The z­value is not truly independent of temperature but may be
considered essentially constant over the temperature ranges used 
in heat sterilization processes.
Z­Value: 
In food industry unit of lethality has been devised, called as F­value. 
This is defined as the equivalent in minutes of 1210
C of all heat considered with respect
to its capacity to destroy spores or vegetative cells of perticular organism
F = D (log N0
 – log N)
Where D = D­value at 1210
C of the organism
            N0
 = Initial population Number/unit volume
            N = Final Population number/unit volume   
It is used to calculate probable number of survivors remaining in a load     
F­Value: 
The inactivation factor is the degree to which the viable population of organisms is
reduced by the treatment applied and is obtained by dividing the initial viable count
by the final count
IF = 10t/D
Where 
 t = holding time at sterilizing temp.
 D = D­value for the marker organism at that temp.
Inactivation Factor
Sterilization Methods
I. Physical Methods
1. Heat Sterilization methods
Moist Heat
Dry Heat
Low Temperatures
l
Moist Heat Sterilization
Mechanism  of  killing  is  a  combinantion  of  protein/nucleic  acid 
denaturation and membrane disruption
Effectiveness  Heavily  dependent  on  type  of  cells  present  as  well  as 
environmental conditions (type of medium or substrate)
Bacterial spores are much more difficult to kill than vegetative cells
Methods for Moist heat Sterilization 
a) Temperature at 100° C – Boiling
b) Temperature below 100° C – Pasteurization
c) Steam Under Pressure – Autoclave
d) Steam at Atmospheric Pressure­ Tyndallization 
Temperature at 100° C – Boiling
Most  vegetative  microorganism  are 
killed in 2­3 mins, but spores make take 
2­3 hrs.
Endospores,  protozoan  cysts,  and  some 
viruses can survive boiling
Pasteurization
Used to reduce microbial numbers in milk and other 
beverages  while  retaining  flavor  and  food  quality  of 
the beverage
Retards spoilage but does not sterilize
Traditional treatment of milk, 63°C for 30 min
Flash  pasteurization  (high­temperature  short  term 
pasteurization);  quick  heating  to  about  72°C  for  15 
sec, then rapid cooling
Tyndallisation
The media containing sugar and gelatin are exposed to 1000
 C for 20 minutes on 
three successive days is known as tyndallization or intermittent sterilization. 
In first exposure it kills vegetative bacteria and spores, since they are in favorable 
medium, will germinate and killed on subsequent occasion.
Steam under pressure : Autoclave
Principle: 
The lethal effect of moist heat is due to the denaturation and 
coagulation of protein.
When  steam  makes  contact  with  the  cooler  articles  in  the 
autoclave  it  condenses  into  water  on  their  surface  and  in 
their interstices.
This  condensation  has  three  effects  of  critical  importance  for  sterilization 
process 
1. It wets the microorganisms on the articles and so provides this essential 
condition for their killing by moist heat.
2. It liberates the very large latent heat of steam and so rapidly heats up the 
articles to the sterilizing temperature.
3. It causes a great contraction in the volume of the stream and so promotes 
the ingress of fresh steam.
Autocalave
Method : 
Materials to be sterilized are placed in perforated diaphragm 
The test­tubes are plugged with non absorbent cotton and covered with paper to avoid 
drenching of plugs during the release of steam when condensation occurs 
After adjusting the water level, lid is kept in position and is closed tightly by means of 
screw clamps. 
Autoclave is switched on, steam valve is kept open until all the air is expelled out and 
steam comes out. 
The steam valve is closed and the pressure begins to rise 
As the pressure begins to rise to 15lbs/sq.in (psi), time is noted. One of the electrical 
coils is switched off (when 2 coils are used) or steam valve is opened partially so as to 
maintain the pressure constant at 15psi. 
After 15 min the autoclave is switched off and is allowed to cool down
After all the steam has escaped from the open steam valves, autoclave is opened and 
all the sterilized materials are removed 
Pharmaceutical applications:
 Sterilization of culture media, apron and rubber tubing etc
 Sterilization of injections solution and suspensions.
  Sterilization  of  surgical  dressings  and  fabrics  such  as  cotton  wool,  gauze  swabs, 
ribbon gauze, masks,  and caps etc.
 Sterilization of packaging materials such  as containers like metal drum, card board 
boxes and wrappings such as nylon film, paper etc.
Dry Heat Sterilization
Principle: The killing effect of dry heat is because of denaturation of protein, 
oxidative  damage and toxic effect of elevated levels of electrolyte.
Method: there are three methods for dry heat sterilization.
Flaming
Incineration
Hot air oven
Flaming:  inoculating  loop  or 
wire,  tip  of  forceps  and  searing 
spatulas  are  held  in  Bunsen     
flame till they become red hot.
Incineration:  it  is  excellent 
method  for  safely  destroying 
materials  such  as  contaminated 
cloths, pathological materials etc.
Hot Air Oven
It  consists  of  a  double  walled  chamber  insulated  with 
asbestos sheet or glass wool to prevent radiation of heat. 
The  chamber  is  heated  electrically  and  maintained 
thermostatically.
 
The  temperature  can  be  noted  on  the  thermometer  which 
can be inserted from top.
The  hot  air  oven  can  be  operated  at  150˚C  for  150  min, 
160˚C for 2 Hrs, 170˚C for 60 min and 180˚C for 30 min for 
sterilization of the articles. 
Hot air oven is generally used for sterilization of glassware, metal 
devices and other articles which are spoiled by autoclaving.
Precautions:
All  the  glassware  must  be  clean  and  dry  to  prevent  internal 
contamination after sterilization.
It is essential to wrap the apparatus before placing them into the oven.
The oven must be loaded when it is cool.
The  temperature  must  not  raise  above  180˚C  in  any  case  otherwise  the 
cotton plugs and papers may be charred.
Before  removing  the  apparatus,  oven  should  be  cooled  to  room 
temperature.
Pharmaceutical Applications:
It is used to sterilize glassware’s forceps, scissors, 
scalpels.
It is used to sterilize all glass syringes.
Pharmaceutical product such as liquid paraffin,
 dusting powder, fats and grease can be sterilize.
 
Sterilization of anhydrous material.
Sterilization of powders.
Decrease microbial metabolism, growth, and reproduction
Chemical reactions occur slower at low temperatures
Liquid water not available
Psychrophilic microbes can multiply in refrigerated foods
Refrigeration halts growth of most pathogens
Slow freezing more effective than quick freezing
Organisms vary in susceptibility to freezing
Refrigeration and Freezing
Dessication is drying (98% of the water is removed) inhibits growth due 
to removal of water
Lyophilization (freeze­drying)
Substance is rapidly frozen and sealed in a vacuum
Substance may also be turned into a powder
Used for long­term preservation of microbial cultures
Prevents formation of damaging ice crystals
Dessication and Lyophilization
The use of dessication as a means of preserving apricots
Lyophilization
Ionizing radiation:  if the radiation ejects orbital electrons from an atom causing ions to 
form
Nonionizing radiation:  excites atoms by raising them to a higher energy state but does 
not ionize them
l
Radiation as a Microbial Control Agent
Ionizing Radiation
Gamma radiation produced by Cobalt­60 source
Powerful sterilizing agent; penetrates and damages both DNA and 
protein; effective against both vegetative cells and spores
Often used for sterilizing disposable plastic labware, e.g. petri dishes; 
as well as antibiotics, hormones, sutures, and other heat­sensitive 
materials
Also can be used for sterilization of food; has been approved but has not 
been widely adopted by the food industry
Mode of action 
Radiation can cause both ionization and excitation and their absorption is not 
affected by structure of the molecule. It may act directly or indirectly.
Direct action: 
Every microorganism and living cell having target region which is radiation 
sensitive, a single ionization of radiation in this sensitive zone or region will kill the 
microorganism. 
Indirect effect: 
Absorption of radiation by water, within or surrounding living cell produces free 
radicals. these are powerful oxidizing and reducing agent capable of damaging 
essential molecule and therefore causing death.  
Sterilization with Ionization; Radiation machine which uses Cobalt 60 as a Gamma radiation to 
sterilize fruits, veg, fish, meat, etc..
Applications 
Sterilization of disposable surgical materials and equipments ex. Plastic syringes, catheters, hypodermic needle and scalpel 
blade.
Sterilization of adhesive dressings.
Sterilization of single application capsule of eye ointment.
Sterilization of catgut
Sterilization of packaging materials such as plastic films and aluminium foil.
Sterilization of bacterial and viral vaccines.  
Used in radiotherapy of cancer.
Increased shelf life of food achieved by Ionizing Radiation
Ultraviolet Radiation
DNA absorbs ultraviolet radiation at 
260 nm wavelength
This causes damage to DNA in the 
form of thymine dimer mutations
Useful for continuous disinfection of 
work surfaces, e.g. in biological safety 
cabinets
Non­Ionizing Radiation
Ultraviolet Radiations 
Method: 
The effectiveness of the method depends on the wavelength absorbed by the particular 
region or component of microbial cell.
260nm  is  the  wavelength  giving  100%  effectiveness  because  it  is  the  adjacent 
wavelength strongly absorb by nucleoprotein.
 
Applications
Irradiation of incoming and internal air of sterile filling area 
of antibiotic plants.
Sterilization of thermolabile products.
Improvement of bacteriological water used to manufacture 
non sterile  pharmaceuticals.
As aid to asepsis in manufacturing houses and hospitals.
To prevent cross infection in hospitals and schools
Modes of Action of 
Ionizing Vs 
Nonionizing 
Radiation
Filters are used to sterilize these heat­labile solutions.
Filters simply remove contaminating microorganisms from
solutions rather than directly destroying them. 
The filters are of two types: 
(a) Depth filters 
 (b) Membrane filters.
Filtration
Consist of  fibrous or granular  materials that  have been bonded into  a thick 
layer filled with twisting channels of small diameter. 
The solution containing microorganisms is sucked in through this layer under 
vacuum and microbial cells are removed by physical screening or entrapment 
and also by adsorption to the surface of
the filter material.
Depth filters
Depth filters are of the following types:
1. Candle filters: 
These are made up of 
(a) diatomaceous earth  
(b) unglazed porcelain 
They are available in different grades of porosity and
 are used widely for purification of water for drinking and industrial uses.
2. Asbestos filters
Made of asbestos such as magnesium silicate. 
Eg: Seitz and Sterimat filters 
  These  are  disposable  and  single­use  discs  available  in  different 
grades. 
They  have  high  adsorbing  capacity  and  tend  to  alkalinize  the 
filtered fluid.
 Their use is limited by the carcinogenic potential of asbestos.
3.Sintered glass filters
These are made up of finely powdered glass 
particles, which are fused together. 
They have low absorbing property and are 
available in different pore sizes. 
These filters, although can be cleaned 
easily, are brittle and expensive.
Membrane Filters
Porous  membranes  with  defined  pore  sizes  that 
remove  microorganisms  primarily  by  physical 
screening. 
These filters are circular porous membranes and are 
usually 0.1 mm thick. 
Although  a  wide  variety  of  pore  sizes  (0.015–12μm) 
are available, membranes with pores about 0.2μm are 
used, because the poresize is smaller than the size of 
bacteria.
This has replaced Depth Filters.
Membrane Filter Sterilisation
Filtration equipment used for microbial control
The role of HEPA filters in Biological Safety Cabinets
High­Efficiency  Particulate  Arresting   
(HEPA)  air  filters  are  used  in  medical 
facilities, automobiles, aircraft, and homes. 
The  filter  must  remove  99.97%  of  all 
particles  greater  than  0.3  micrometer  from 
the air that passes through. 

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